Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq101 102 5e-17
seq292 98.7 7e-16
seq56 89.7 3e-13
>seq101
Length=4626942
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|||||||||| || | |||| ||| || ||| ||||||||| ||||||||||| ||
Sbjct 1982752 CCACCTCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGAA 1982811
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || ||||||||||| | | |||||| || | ||
Sbjct 1982812 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGG 1982871
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || || || ||| |||| || | ||||||||| | ||||||
Sbjct 1982872 ATGCCCTCCTTATCCTGGATCTTGGCCTTC-ACATTTTCGATGGTGTCGCTGGGTTCCAC 1982930
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || || || || || | || || || |||||||||||
Sbjct 1982931 TTCCAGGGTTATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982978
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| |||| || | |||| ||| |||||| |||||| || ||||||||||| ||
Sbjct 1982524 CCACCCCTCAGGCGCAGGACCAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAA 1982583
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || ||||||||||| | | |||||| || | ||
Sbjct 1982584 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGG 1982643
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || || || ||| |||| || | |||||| || | ||||||
Sbjct 1982644 ATGCCCTCCTTATCCTGGATCTTGGCCTTC-ACATTTTCGATGGTGTCACTGGGTTCCAC 1982702
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | || || || |||||||||||
Sbjct 1982703 TTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982750
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| |||| || | |||| ||| || ||| |||||| || ||||||||||| ||
Sbjct 1982980 CCACCCCTCAGGCGCAGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 1983039
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || ||||||||||| | | |||||| || | ||
Sbjct 1983040 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGG 1983099
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || || || ||| |||| || | |||||| || | ||||||
Sbjct 1983100 ATGCCCTCCTTATCTTGGATCTTGGCCTTC-ACATTTTCGATGGTGTCACTGGGTTCCAC 1983158
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || | || || || |||||||||||
Sbjct 1983159 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 1983206
>seq292
Length=3256830
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
|||||| || || ||| |||||| || || |||||||| || || ||||| | || ||
Sbjct 1957758 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCATCTTC 1957817
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|| ||||| || |||||||||| ||||||||| || | || | || || || ||
Sbjct 1957818 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTG 1957877
Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
||||| ||| ||| | ||| |||||| || | || || || | ||||| || |
Sbjct 1957878 GATTTTGGCTTT-AACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCT 1957936
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || | || || ||||||||||||||
Sbjct 1957937 TGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1957967
>seq56
Length=5723395
Score = 89.7 bits (98), Expect = 3e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | || | ||||| || || ||| ||| || || |||||||| || ||
Sbjct 4239612 CCCCCTCTGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4239671
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| || ||||| |||| | |||||| || | ||
Sbjct 4239672 AGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 4239731
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || |||||||| || ||| || | | | || | |||||| || | |||||
Sbjct 4239732 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 4239790
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
|| | ||||| || ||||| || || || || || ||||||||||| ||
Sbjct 4239791 CTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATTGT 4239841
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||| || ||||| || | || | || |||||| ||| || || |||||||| || |
Sbjct 4238926 CACCGCCCCTCAAGCGCAGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 4238985
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| | || |||| ||||| || ||||| |||| | |||||| || | |
Sbjct 4238986 ACAGGGTGCGCCCATCTTCCAGCTGTTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGGG 4239045
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || ||||| || || ||| ||| | | | || | |||||| || | |||
Sbjct 4239046 GGATGCCCTCTTTTTCTTGGATCTTCCCTTTGA-CGTTCTCGATGGTGTCACTGGGCTCC 4239104
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| || || || || || || || || |||||||||||
Sbjct 4239105 ACCTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239154
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | || | ||||| || |||||| ||| || || || ||||| || ||
Sbjct 4239156 CCCCCTCTGAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGAC 4239215
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| || ||||| |||| | |||||| || | ||
Sbjct 4239216 AGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 4239275
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || |||||||| || ||| || | | | || | |||||| || | |||||
Sbjct 4239276 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 4239334
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || || || || || |||||||||||
Sbjct 4239335 CTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239382
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| ||||| | || | ||||| || || ||| ||| || || |||||||| || ||
Sbjct 4239384 CCCCCTCTGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4239443
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| ||||| || ||||| |||| | |||||| || | ||
Sbjct 4239444 AGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 4239503
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || |||||||| || ||| || | | | || | |||||| || | |||||
Sbjct 4239504 ATGCCCTCTTTGTCCTGGATCTTCGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCCAC 4239562
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || || || || || |||||||||||
Sbjct 4239563 CTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328657573538880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |