Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq695 125 2e-23
seq694 123 6e-23
seq517 123 6e-23
seq1820 120 7e-22
seq26 118 3e-21
seq101 102 2e-16
>seq695
Length=815165
Score = 125 bits (138), Expect = 2e-23
Identities = 161/220 (73%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 206173 CAGATATT--TTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG 206230
||||| || ||| ||||| || || || || || |||||| | || || ||| || |
Sbjct 16686 CAGATTTTCGTTG-AAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGG 16744
Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290
| ||| | ||| |||||| |||||||| || || ||||||||| || || |
Sbjct 16745 ATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGC 16804
Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350
| ||||| ||||| || || |||| ||||||||||| | |||||| | || ||||||
Sbjct 16805 AGAGACTGATCTTTGCTGGCAAGCCACTGGAAGATGGACGTACTTTGTCTGACTACAACA 16864
Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
| || || ||||| |||||||| ||||| |||||||| ||
Sbjct 16865 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTCCG 16904
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| |||||||| ||||| |||||||| ||||| || || | || ||||||| ||||||
Sbjct 16904 CGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 16845
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
| |||||||||||| |||| || || ||||| ||
Sbjct 16844 CGTCCATCTTCCAGTGGCTTGCCAGCAAAGATCAG 16810
>seq694
Length=814564
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || |||||| | || || ||| || || ||| | |||
Sbjct 212364 AAAACCCTAACGGGGAAGACCATCACTCTTGAGGTTGAACCCTCGGATACAATAGAAAAT 212305
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| |||||||| || || ||||||||| || || || ||||| |||||
Sbjct 212304 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTAATCTTT 212245
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | || |||||| | || || ||||
Sbjct 212244 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGTAGTCC 212185
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| |||||||| ||
Sbjct 212184 ACTCTTCATCTTGTGTTGAGACTCCG 212159
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| |||||||| ||||| |||||||| |||| || || | || ||||||| ||||||
Sbjct 212159 CGGAGTCTCAACACAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTCAGACAAAGTA 212218
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
| |||||||||||| ||||| || || ||||| ||
Sbjct 212219 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATTAG 212253
>seq517
Length=1171097
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || |||||| | || || ||| || || ||| | |||
Sbjct 1142429 AAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGGATACAATAGAAAAT 1142488
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| |||||||| || || ||||||||| || || || ||||| |||||
Sbjct 1142489 GTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATCTTT 1142548
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | |||||| | | |||||| | || || |||||
Sbjct 1142549 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTAACTACAACTTTCAAAAGGAGTCC 1142608
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||||| ||||| |||||||| ||
Sbjct 1142609 ACTCTTCATCTTGTGTTGAGACTCCG 1142634
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| |||||||| ||||| |||||||| ||||| || || | || |||| || ||||||
Sbjct 1142634 CGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAAAGTTGTAGTTAGACAAAGTA 1142575
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
| |||||||||||| ||||| || || ||||| ||
Sbjct 1142574 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG 1142540
>seq1820
Length=90317
Score = 120 bits (132), Expect = 7e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| |||||| ||||||| ||||| |
Sbjct 66770 AAGACACTGACTGGCAAGACCATCACCCTGGAGGTGGAACCCAGTGACACAATCGAAACT 66829
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| | || || ||| || || ||||||||
Sbjct 66830 GTGAAGGCCAAGATCCAAGATAAAGAGTGCATCCGCCCCGACCAGCAGAGGCTTATCTTT 66889
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 66890 GCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACCTCCAGAAAGAGTCG 66949
Query 206365 ACTCTTCACCTTGT 206378
||||| ||||| ||
Sbjct 66950 ACTCTCCACCTGGT 66963
Score = 86.0 bits (94), Expect = 1e-11
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|| ||||| ||||| ||||||||||||| || || |||| | ||| | |||||||||
Sbjct 66963 ACCAGGTGGAGAGTCGACTCTTTCTGGAGGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 66904
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCC 204848
|||||||| ||||| ||||||||||
Sbjct 66903 AGCTGCTTGCCGGCAAAGATAAGCC 66879
>seq26
Length=7528108
Score = 118 bits (130), Expect = 3e-21
Identities = 159/221 (72%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| ||||| || || || || || |||||| | | || ||| || ||
Sbjct 6810589 CAGATATTCATGAAAACCCTAACGGGGAAGACCATCACTCTCAAGGTTGAACCCTCGGAT 6810648
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | ||| |||||| |||||||| || || ||||||||| || || ||
Sbjct 6810649 ACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCCGATCAGCAG 6810708
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGA---AGGACTTTGGCCGATTACAAC 206349
|| || ||||| || || ||||| ||||||||||| | |||||| | || ||||||
Sbjct 6810709 AGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTACTTTGTCTGACTACAAC 6810768
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
| || || ||||| |||||||| ||||| |||||||||||
Sbjct 6810769 ATTCAAAAGGAGTCCACTCTTCAGCTTGTGTTGAGACTTCG 6810809
Score = 89.7 bits (98), Expect = 1e-12
Identities = 85/108 (79%), Gaps = 3/108 (3%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAA---A 204808
||||||||||| ||||| |||||||| ||||| || || | || ||||||| ||| |
Sbjct 6810809 CGAAGTCTCAACACAAGCTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 6810750
Query 204809 GTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|| | |||||||||||| ||||| || || ||||| |||| || |||
Sbjct 6810749 GTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGA 6810702
>seq101
Length=4626942
Score = 102 bits (112), Expect = 2e-16
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| ||||||||||| |||||| |||||
Sbjct 1982735 AAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGTGACACCATCGAAAAT 1982676
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || || ||| || || ||||| ||
Sbjct 1982675 GTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTTATTTTT 1982616
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 1982615 GCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCC 1982556
Query 206365 ACTCTTCACCTTGT 206378
||||| || || ||
Sbjct 1982555 ACTCTGCATCTGGT 1982542
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| |||||| |||||| |||||
Sbjct 1983191 AAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAACCCAGTGACACCATCGAAAAT 1983132
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || || || || || ||| || || ||||| ||
Sbjct 1983131 GTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTTATTTTT 1983072
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 1983071 GCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCC 1983012
Query 206365 ACTCTTCACCTTGT 206378
|| || || || ||
Sbjct 1983011 ACCCTGCATCTGGT 1982998
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | ||||| || ||| || |||||
Sbjct 1982507 AAGACCCTGACCGGCAAGACCATCACCCTAGAAGTAGAGCCCAGTGATACCATCGAAAAT 1982448
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || || || || || ||| || || ||||| ||
Sbjct 1982447 GTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTTATTTTT 1982388
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 1982387 GCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 1982328
Query 206365 ACTCTTCACCTTGTT 206379
||||| ||||| |||
Sbjct 1982327 ACTCTCCACCTGGTT 1982313
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || || || ||||||||||| ||||| |||||
Sbjct 1982963 AAGACCCTGACCGGCAAGACCATAACCCTGGAAGTGGAACCCAGCGACACCATCGAAAAT 1982904
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || || ||| || || ||||| ||
Sbjct 1982903 GTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTTATTTTT 1982844
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||||||||| | ||| | | ||||||||| |||| ||||||||
Sbjct 1982843 GCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAAAAAGAGTCC 1982784
Query 206365 ACTCTTCACCTTGT 206378
|| || || || ||
Sbjct 1982783 ACCCTGCATCTGGT 1982770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181645318446469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |