Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq86 91.5 1e-13
seq694 89.7 5e-13
seq101 86.0 6e-12
seq517 84.2 2e-11
seq695 82.4 7e-11
>seq86
Length=5199016
Score = 91.5 bits (100), Expect = 1e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564
|||| || ||||| | |||||||||||||||||| || ||||| || ||||| |||
Sbjct 130216 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 130275
Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
|| |||||||| || | |||||| |||||||||||||
Sbjct 130276 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 130313
>seq694
Length=814564
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||| ||||||||||||||||| || ||||| |||||| || || || || | |
Sbjct 212186 GACTACTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCA 212245
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
||||||| | ||| ||||| ||||| || ||||| ||||| ||| || || |
Sbjct 212246 AAGATTAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACA 212305
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || || || | || | || || || || || |||||
Sbjct 212306 TTTTCTATTGTATCCGAGGGTTCAACCTCAAGAGTGATGGTCTTCCCCGTTAGGGTTTTC 212365
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 212366 ACGAAAATCTGCAT 212379
>seq101
Length=4626942
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| |||| ||| | | | ||||||||||| |||||||| || | || ||
Sbjct 1982760 CAGGCGCAGGACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGAAAGAGTGCG 1982819
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| ||||| || |||| | | || || | ||| || || || || ||||| ||
Sbjct 1982820 GCCATCTTCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTC 1982879
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| || || |||| | ||| | || ||| | || |||||||| | ||
Sbjct 1982880 CTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCGCTGGGTTCCACTTCCAGGGT 1982939
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
| || || || ||||| || || | ||| |||||||||
Sbjct 1982940 TATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 1982979
>seq517
Length=1171097
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||||| |||||||| || ||||| |||||| || || || || | |
Sbjct 1142607 GACTCCTTTTGAAAGTTGTAGTTAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCA 1142548
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| ||||| || ||||| ||||| ||| || || |
Sbjct 1142547 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACA 1142488
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | || || || |||| || | || || || || || |||||
Sbjct 1142487 TTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTC 1142428
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 1142427 ACGAAAATCTGCAT 1142414
>seq695
Length=815165
Score = 82.4 bits (90), Expect = 7e-11
Identities = 136/195 (70%), Gaps = 1/195 (1%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||||||||||||||| || ||||| |||||| || | || || | |
Sbjct 16877 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTGGCTTGCCAGCA 16818
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| ||||| ||||| || ||||| ||||| ||| || || |
Sbjct 16817 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACA 16758
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT- 132108
| ||| | ||||| | || || || |||| || | || || || || || |||||
Sbjct 16757 TTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTC 16698
Query 132109 TATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 16697 AACGAAAATCTGCAT 16683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476542156910040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |