Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq101 116 3e-21
seq1820 105 6e-18
seq694 105 6e-18
seq517 105 6e-18
seq292 105 6e-18
seq695 104 2e-17
seq26 100 3e-16
seq108 95.1 1e-14
>seq101
Length=4626942
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| ||||| ||||||||||| | | || || | || ||||||||||| || |||||
Sbjct 1982787 CTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 1982846
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || |||||| ||| |||||| ||||| | |
Sbjct 1982847 AATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 1982906
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | |||||||| | |||||| |||| || || || || || |||| || |||||
Sbjct 1982907 TTCGATGGTGTCGCTGGGTTCCACTTCCAGGGTTATGGTCTTGCCGGTCAGGGTCTTCAC 1982966
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1982967 GAAGATCTGCAT 1982978
Score = 114 bits (126), Expect = 1e-20
Identities = 143/196 (73%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || ||||||||||| || |||||
Sbjct 1983015 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 1983074
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || |||||| || |||||| ||||| | |
Sbjct 1983075 AATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTTCACATT 1983134
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | ||||||||||| ||||| || || || |||| || |||||
Sbjct 1983135 TTCGATGGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1983194
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 1983195 GAAGATCTGCATTTTG 1983210
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || ||||||||||| || |||||
Sbjct 1982559 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 1982618
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || |||||| ||| |||||| ||||| | |
Sbjct 1982619 AATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 1982678
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | |||||| |||| ||||| || || || |||| || |||||
Sbjct 1982679 TTCGATGGTGTCACTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 1982738
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1982739 GAAGATCTGCAT 1982750
Score = 89.7 bits (98), Expect = 5e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || ||||||||||| | | || || | || ||||||||||| || |||||
Sbjct 1982331 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 1982390
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || |||||| || |||||| ||||| | |
Sbjct 1982391 AATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCTTGGATCTTGGCCTTCACATT 1982450
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | || || || | || || || | ||||| || || || |||| || |||||
Sbjct 1982451 TTCGATGGTATCACTGGGCTCTACTTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 1982510
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1982511 GAAGATCTGCAT 1982522
>seq1820
Length=90317
Score = 105 bits (116), Expect = 6e-18
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || | ||||||||| | | || || | || ||||||||||| || |||||
Sbjct 66946 CTCTTTCTGGAGGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 66887
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | | | || ||| || || |||||| ||||| |||
Sbjct 66886 GATAAGCCTCTGCTGGTCGGGGCGGATGCACTCTTTATCTTGGATCTTGGCCTTCACAGT 66827
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||| || | ||||||||||| ||||| || || || |||| || |||||
Sbjct 66826 TTCGATTGTGTCACTGGGTTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTCAC 66767
Query 35725 AAATATCTGCATTCTG 35740
|| ||||||||| ||
Sbjct 66766 GAAAATCTGCATTTTG 66751
>seq694
Length=814564
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | ||| | || || ||||||||||||||| || | |
Sbjct 212153 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTCAGAC 212212
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| ||||| || ||||| || | | |||||| || | ||||
Sbjct 212213 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGGA 212272
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| ||||| ||| | | || | | || || | ||| |||
Sbjct 212273 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 212332
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| | ||||| || || ||||| | |||||||| || |||||||| |||
Sbjct 212333 TCAAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCATCCTG 212383
>seq517
Length=1171097
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | ||| | || ||||||||||| |||||| | | |
Sbjct 1142640 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAAAGTTGTAGTTAGAC 1142581
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| ||||| || ||||| |||| | |||||| || | ||||
Sbjct 1142580 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 1142521
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| ||||| ||| | | || | | || || | ||| |||
Sbjct 1142520 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 1142461
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| | ||||| || || ||||| | |||||||| || |||||||| |||
Sbjct 1142460 TCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCATCCTG 1142410
>seq292
Length=3256830
Score = 105 bits (116), Expect = 6e-18
Identities = 157/219 (72%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || ||| || || || |||||||| | || || || | || ||
Sbjct 1957758 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAATCAGACAGAGTGCGGCCATCTTC 1957817
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||| || |||||||| |||| ||||||||||| | || | || |||||| ||
Sbjct 1957818 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCTTG 1957877
Query 35647 GATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705
||| ||| |||| | ||| | | ||||| || | || ||||| | ||||| || |
Sbjct 1957878 GAT-TTTGGCTTTAACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCT 1957936
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCG 35744
| ||||||| || |||||||| ||||||| ||| ||||
Sbjct 1957937 TGCCCGTCAGGGTCTTCACAAAGATCTGCA-TCTCTGCG 1957974
>seq695
Length=815165
Score = 104 bits (114), Expect = 2e-17
Identities = 163/232 (70%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | ||| | || |||||||||||||||||| || | |
Sbjct 16910 CCACCACGGAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 16851
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| |||| || ||||| |||| | |||||| || | ||||
Sbjct 16850 AAAGTACGTCCATCTTCCAGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 16791
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| ||||| ||| | | || | | || || | ||| |||
Sbjct 16790 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 16731
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTC-ACAAATATCTGCATTCTG 35740
|| | ||||| || || ||||| | |||||| || || |||||||| |||
Sbjct 16730 TCGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCAACGAAAATCTGCATCCTG 16679
>seq26
Length=7528108
Score = 100 bits (110), Expect = 3e-16
Identities = 163/234 (70%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||||| | || | || |||||||||||||||||| || | |
Sbjct 6810815 CCACCACGAAGTCTCAACACAAGCTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 6810756
Query 35570 AAGGTT---CGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
|| || | | || ||||| ||||| || ||||| |||| || |||||| || | |
Sbjct 6810755 AAAGTAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGA 6810696
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
|||| | ||||| ||| ||||| ||| | | || | | || || | |||
Sbjct 6810695 GGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCA 6810636
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|||| | ||||| || || ||||| | ||||||| |||||||||||||||
Sbjct 6810635 ACCTTGAGAGTGATGGTCTTCCCCGTTAGGGTTTTCATGAATATCTGCATTCTG 6810582
>seq108
Length=4373546
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||||| | |||||||| | ||| | || ||||||||||||| |||| || |
Sbjct 1070436 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGCCTCCTTTTGAATGCTGTAGTCCCAC 1070495
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||||| | || |||| ||||| || || || ||||| | |||||| | | ||||
Sbjct 1070496 AGAGTTCGTCCATCTGCCAGTTGCTTGCCAGCCAAGATCAATCTCTGCTGATTAGGAGGA 1070555
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||||| ||| |||||| ||| | || | || | || ||||| ||
Sbjct 1070556 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACGTTTTCTACTCTATCTGAGGATTCAGCC 1070615
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || ||||| | ||||||||||| ||||||||
Sbjct 1070616 TCAAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCAT 1070662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450728296912120
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