Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq863 123 4e-23 >seq863 Length=591582 Score = 123 bits (136), Expect = 4e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 214001 ATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTTACGAA 214060 ||||| ||||| || || ||||| || |||||||| | | ||| | ||| | ||| | Sbjct 189292 ATTGATGGGGAGGTGTATCCTCCCACAGTCAAGGATACTCAGGTGGAGATGATCTACCCA 189351 Query 214061 CCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCGTGCCC 214120 ||| |||||| ||| | | || || || |||| | || | || || | ||||| Sbjct 189352 CCCCACGTTCCTGAACACCTGCGGTTTGCTGTGGGCCAGGAAGTCTTCGGGTTGGTGCCT 189411 Query 214121 GGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACGTGCTG 214180 ||| | ||| ||||||||| || |||||| | || || ||||| || || || |||||| Sbjct 189412 GGTCTGATGATGTACGCCACAATTTGGCTGCGGGAACATAACAGAGTGTGTGATGTGCTG 189471 Query 214181 AAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 ||||| |||||||| || ||| | || || | ||| ||||||| Sbjct 189472 AAACAGGAGCACCCAGAGTGGGATGATGAGCGGCTATTCCAGA 189514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723236015043360