Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq54 82.4 8e-11 >seq54 Length=5886867 Score = 82.4 bits (90), Expect = 8e-11 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-CTATTTTCTGGCTCAAAAAGCGTG 60060 |||||||||||||||||| ||||| || || || | | || ||||||||||| || |||| Sbjct 1575052 CGTGGAAGGAATCTTCTTTTCTGGTTCTTT-TGCGTCAATATTCTGGCTCAAGAAACGTG 1574994 Query 60061 GCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 |||| ||||| ||||| | || ||||| || || || Sbjct 1574993 GCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTAT 1574957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548445339326160