Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq669 104 3e-17
seq91 100 3e-16
seq54 89.7 6e-13
>seq669
Length=845783
Score = 104 bits (114), Expect = 3e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||| ||||||| |||||||||||| ||||||||| ||| || || || || ||
Sbjct 793649 GTGAAAATATAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGTCGAGTTCCAAACTGA 793708
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| | | ||| | ||||||| ||||||||||| |||||||| || |||
Sbjct 793709 CCAATAGGCTGAAGCAAGTTAATGTTGTTGCTTCCCACAAAGTTCTGAGCCAAATTCACA 793768
Query 117425 ATCGT 117429
|| ||
Sbjct 793769 ATGGT 793773
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||| || || || | ||| || ||||| |||||||| || || |||||||||||
Sbjct 793649 GTGAAAATATAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGTCGAGTTCCAAACTGA 793708
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| |||| || | ||| | ||||||| ||||| || ||||||||||||||||||
Sbjct 793709 CCAATAGGCTGAAGCAAGTTAATGTTGTTGCTTCCCACAAAGTTCTGAGCCAAATTCACA 793768
Query 152149 ATCGT 152153
|| ||
Sbjct 793769 ATGGT 793773
>seq91
Length=8299439
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| ||||| |||| || |||| ||||||||||||| || | ||||| || ||
Sbjct 6129832 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTAGTACCAAACTGA 6129891
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| ||| ||||||||||| ||| |||||||| || |||||||| |||| |
Sbjct 6129892 CCAATGGGCTGCAAAAGGTTCAGGTTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 6129951
Query 117425 ATCGT 117429
|| ||
Sbjct 6129952 ATGGT 6129956
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|||||||||||||| | || || | |||||||||||| ||||| || ||||||||
Sbjct 6129832 GTGAAGATGTATCGAGGACTAGCAGAATCCTTGCCACCATGCAGCCTAGTACCAAACTGA 6129891
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| ||||| | ||||| ||||| ||| ||||| ||||||||||||||||| | |
Sbjct 6129892 CCAATGGGCTGCAAAAGGTTCAGGTTATTGCTACCCACAAAATTCTGAGCCAAATTGATA 6129951
Query 152149 ATCGT 152153
|| ||
Sbjct 6129952 ATGGT 6129956
>seq54
Length=5886867
Score = 89.7 bits (98), Expect = 6e-13
Identities = 100/131 (76%), Gaps = 2/131 (2%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| || | |||||| ||||||| ||||||||||| || ||||| |||||
Sbjct 1574945 TCATCTCTGCTGATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCACGTTTCTTG 1575004
Query 74832 AACCAAAAGA-TGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGC 74890
| ||| || | || | || || |||||| |||||||| ||||| || || |||||
Sbjct 1575005 AGCCAGAATATTGACGCA-AAAGAACCAGAAAAGAAGATTCCTTCCACGGCAGCGAAGGC 1575063
Query 74891 GACAAGGCGTT 74901
|||| ||||
Sbjct 1575064 CACAACCCGTT 1575074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547136728922200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |