Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq694 167 3e-36
seq517 158 1e-33
seq101 152 6e-32
seq695 150 2e-31
seq26 145 9e-30
seq292 140 4e-28
seq56 138 1e-27
seq108 134 2e-26
seq749 100 3e-16
seq37 98.7 1e-15
seq323 93.3 5e-14
seq84 93.3 5e-14
seq63 91.5 2e-13
seq12 91.5 2e-13
seq143 89.7 6e-13
seq6 89.7 6e-13
seq943 87.8 2e-12
seq91 86.0 7e-12
seq9 84.2 2e-11
seq8 84.2 2e-11
seq669 82.4 9e-11
seq30 82.4 9e-11
seq1 82.4 9e-11
>seq694
Length=814564
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || || || || ||||| || |||||||||||||| |
Sbjct 212379 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTTGAGGTTGAACCCTCG 212320
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | ||||| || |||||||| ||||| ||||||||||| || |||
Sbjct 212319 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 212260
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | ||||| |||||||| |||||||| || |||| ||||| | | ||||| ||
Sbjct 212259 CAGAGACTAATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 212200
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||| | |||||||||||||| || ||| | || || |||||
Sbjct 212199 ATTCAAAAGTAGTCCACTCTTCATCTTGTGTTGAGACTCCGTGGTGG 212153
>seq517
Length=1171097
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || || || || ||||| || ||||| |||||||| |
Sbjct 1142414 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 1142473
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | ||||| || |||||||| ||||| ||||||||||| || |||
Sbjct 1142474 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 1142533
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| |||||||| || |||| ||||| | | |||| ||
Sbjct 1142534 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTAACTACAAC 1142593
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||||||||| || ||| | || || |||||
Sbjct 1142594 TTTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTCCGTGGTGG 1142640
>seq101
Length=4626942
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || || || || || | ||
Sbjct 1982750 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 1982691
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | |||| ||||||| || || ||||| |||||||| || || || ||||||
Sbjct 1982690 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982631
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || |||||||| || ||||| || || |||| || || || | || || ||
Sbjct 1982630 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982571
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || |||||||| ||||| ||| |||| || | |||||
Sbjct 1982570 ATCCAGAAAGAGTCCACTCTGCATCTGGTCCTGCGCCTGAGGGGTGG 1982524
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || || || || ||| | ||
Sbjct 1982522 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAAGTAGAGCCCAGT 1982463
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | |||| ||||||| || || || || |||||||| || || || ||||||
Sbjct 1982462 GATACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAG 1982403
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || ||||||||||| ||||| || || |||| || || || | || || ||
Sbjct 1982402 CAGAGGCTTATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982343
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || ||||| || || || | ||||| | |||||
Sbjct 1982342 ATCCAGAAAGAGTCGACTCTCCACCTGGTTCTTCGTCTGAGGGGTGG 1982296
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || || || || || | |
Sbjct 1982978 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATAACCCTGGAAGTGGAACCCAGC 1982919
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | |||| ||||||| || || ||||| |||||||| || || || ||||||
Sbjct 1982918 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982859
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || |||||||| || ||||| || || |||| || || || | || || ||
Sbjct 1982858 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982799
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||| || ||||| || ||||| ||| |||| || | |||||
Sbjct 1982798 ATCCAAAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGAGGTGG 1982752
>seq695
Length=815165
Score = 150 bits (166), Expect = 2e-31
Identities = 171/228 (75%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTC-AAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||| || || || || || || || || ||||| || ||||| |||||||| |
Sbjct 16683 ATGCAGATTTTCGTTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 16742
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| || | |||| | ||||| || |||||||| ||||| ||||||||||| || ||
Sbjct 16743 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 16802
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | || || |||||||| |||| ||| || |||| ||||| | | ||||| ||
Sbjct 16803 GCAGAGACTGATCTTTGCTGGCAAGCCACTGGAAGATGGACGTACTTTGTCTGACTACAA 16862
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||||||||| || ||| | || || |||||
Sbjct 16863 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTCCGTGGTGG 16910
>seq26
Length=7528108
Score = 145 bits (160), Expect = 9e-30
Identities = 172/231 (74%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || | || || || || || ||||| || ||||| ||||||| |
Sbjct 6810585 AATGCAGATATTCATGAAAACCCTAACGGGGAAGACCATCACTCTCAAGGTTGAACCCTC 6810644
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| || | |||| | ||||| || |||||||| ||||| ||||||||||| || ||
Sbjct 6810645 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCCGATCA 6810704
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC--CCTAG-CAGACTA 27581
|||| | || || |||||||| |||||||| || |||| |||| | | | | |||||
Sbjct 6810705 GCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTACTTTGTCTGACTA 6810764
Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||||||| ||||||||||| || || ||| | ||||| |||||
Sbjct 6810765 CAACATTCAAAAGGAGTCCACTCTTCAGCTTGTGTTGAGACTTCGTGGTGG 6810815
>seq292
Length=3256830
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || || ||||| ||| | ||
Sbjct 1957967 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1957908
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | || || ||||| || || |||||||| || || || ||||||
Sbjct 1957907 GACACCATTGAGAACGTTAAAGCCAAAATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 1957848
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| |||||||| || || || || || |||| || || || | || || |||
Sbjct 1957847 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 1957788
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || ||||| || || | || | || || || |||||
Sbjct 1957787 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCCGGGGTGG 1957741
>seq56
Length=5723395
Score = 138 bits (152), Expect = 1e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| | ||||||||||| || || || ||||| ||| | ||
Sbjct 4239382 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 4239323
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||||| || || |||||||| ||||| || || || ||||||
Sbjct 4239322 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 4239263
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || || || || || |||| || ||||| | ||||| |||
Sbjct 4239262 CAGAGGCTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAT 4239203
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| |||||||| || || ||
Sbjct 4239202 ATCCAGAAGGAGTCCACTCTGCACCTGGT 4239174
Score = 129 bits (142), Expect = 7e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| | ||||||||||| || || || ||||| ||| | ||
Sbjct 4239610 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 4239551
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||||| || || |||||||| ||||| || || || ||||||
Sbjct 4239550 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 4239491
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || || || || || |||| || ||||| | ||||| ||
Sbjct 4239490 CAGAGGCTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 4239431
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| ||||| || || || ||
Sbjct 4239430 ATCCAGAAGGAGTCCACGCTGCACCTGGT 4239402
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| | ||||||||||| || || || ||||| ||| | ||
Sbjct 4239154 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 4239095
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | || | || || || || || ||||| || || || ||||||
Sbjct 4239094 GACACCATCGAGAACGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCTGACCAG 4239035
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || || || || || |||| || ||||| | ||||| ||
Sbjct 4239034 CAGAGGCTGATCTTTGCAGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 4238975
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620
|||| ||||| |||||||| || || ||| ||||
Sbjct 4238974 ATCCAGAAGGAGTCCACTCTGCACCTCGTCCTGCG 4238940
>seq108
Length=4373546
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || ||||| || ||||| || |||||||||| ||| ||
Sbjct 1070662 ATGCAGATTTTTGTGAAAACCCTTACGGGGAAGACCATCACTCTTGAGGCTGAATCCTCA 1070603
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
||||| | | ||| | ||||| || || ||||| ||||| ||||||||||| | |||
Sbjct 1070602 GATAGAGTAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTAATCAG 1070543
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || || ||||| |||||||| | |||| || || || ||||| |
Sbjct 1070542 CAGAGATTGATCTTGGCTGGCAAGCAACTGGCAGATGGACGAACTCTGTGGGACTACAGC 1070483
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||||||||||||| || ||| | ||| | |||||
Sbjct 1070482 ATTCAAAAGGAGGCCACTCTTCATCTTGTGTTGAGACTTTGTGGTGG 1070436
>seq749
Length=741069
Score = 100 bits (110), Expect = 3e-16
Identities = 110/146 (75%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | ||||| || |||||||| ||||| ||||||||||| || |||
Sbjct 337933 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 337992
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
| | | || || | |||||| |||||||| || |||| | ||| | ||||| ||
Sbjct 337993 CCGAGACTGATCTGTGCTGGCAAGCAACTGGAAGATGGACATACTTT----GACTACAAC 338048
Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611
| |||||||| |||| |||||||||
Sbjct 338049 ATTCAAAAGGAGTCCATTCTTCATCT 338074
>seq37
Length=7442708
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 27421 AAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG---TCAGGTGATAGCATTGCA 27477
|| || ||||| || ||| ||| | |||| ||||||| |||| | | |||| |
Sbjct 5921231 AAAACCCTTACGGGGGAGATTATCATTCTTAAGGTTGAACCCTCAGCT-ACAGCAAA--A 5921175
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||||| || |||||||||||||| |||||||||| || |||||| | || |
Sbjct 5921174 AATGTAAAGGCCAAGATTCAGGACAAGGAAGGAATTCCTCGTGATCAGCAGAGACTGAAC 5921115
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| ||||| |||||||| || || | | ||| | | ||| | || | ||||||||
Sbjct 5921114 TTGGCTGGCAAGCAACTGGAAGACGGACATACTTTGTCCGACCACAACATTCAAAAGGAG 5921055
Query 27598 TCCACTCTTCATCT 27611
||| |||||| |||
Sbjct 5921054 TCCGCTCTTCGTCT 5921041
>seq323
Length=1978753
Score = 93.3 bits (102), Expect = 5e-14
Identities = 113/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 27409 CAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGAT 27468
|| |||||||| |||| || ||| |||||| || || || ||||| ||| | ||||
Sbjct 83900 CAGATCTTTGTGAAGATCCTGACCACCAAGACCATCACCCTAGAGGTAGAGCCCAGTGAC 83841
Query 27469 AGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAG 27528
| || | |||| | || | ||| || ||||||||||| || || || |||||||||
Sbjct 83840 ATCACGGAAAATGTCAAAGGCAAAGCCCAAGACAAGGAGGGCATCCCACCTGACCAGCAG 83781
Query 27529 CGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
| ||| ||| ||| || || || ||||||||||
Sbjct 83780 CATCTGATTCTTGTGGGCAAACAGCTCGAGGATG 83747
>seq84
Length=4826052
Score = 93.3 bits (102), Expect = 5e-14
Identities = 163/234 (70%), Gaps = 10/234 (4%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGC-AAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||| || || | || || |||||||| ||| | || || | ||||||| |
Sbjct 1439129 ATGCAGATTTTCATGAAAACCCTTACCGGGGAAGGCCATCGCTATCTAGGTTGAACCCTC 1439070
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| || | |||| | ||||| || |||||||| ||||| ||||||||||| || |
Sbjct 1439069 AGATACAATAGAAAATGTAAAGGCAAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCT 1439010
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGA------ 27578
|||| | || || ||||||| || ||||| || ||| ||||| || | ||
Sbjct 1439009 GCAGAGACTGATCTTTGCTGCCAAACAACTGGAAGATAGACGTACTTTATCTGATGATAT 1438950
Query 27579 CTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||| || | || ||| |||||||||||||| || ||| | |||| |||||
Sbjct 1438949 TTATCATTTAGAAGAGG--TCCACTCTTCATCT-GTGTTGAGATTTCGTGGTGG 1438899
>seq63
Length=7304539
Score = 91.5 bits (100), Expect = 2e-13
Identities = 143/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466
|||| || ||||| |||| || | |||||||| || || |||||||| || | |||
Sbjct 4206380 TGCAGATTTTTGTGGAGACCCTAGCTGGCAAGACCATCACCCTTGAGGT-GACCCCAGTG 4206438
Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526
| || || || | || || ||||| || ||||||||||| || || || | | |||
Sbjct 4206439 GCATCACTGAGAAGATCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGCCTAGC 4206498
Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586
|||||| |||||||| || || | | ||||| | || || | ||||||| |||
Sbjct 4206499 AGCGTCGGATTTTTGCGGGCAAACCGCCAGAGGA-CAGCGCACTGTGTCAGACTACAATA 4206557
Query 27587 TCCAAAAGGAATCCACTCTTCA 27608
||| || || |||||||| ||
Sbjct 4206558 GCCAGAAAGAGTCCACTCTGCA 4206579
>seq12
Length=8826349
Score = 91.5 bits (100), Expect = 2e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
||| |||||||| ||||| || || |||||||| || || |||||||| || | ||||
Sbjct 5434003 GCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTTGAGGTCAAGCCCAGTGA 5434062
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
| ||||| ||| | || || ||||| || |||||||||| || | || | || ||
Sbjct 5434063 CACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACATCCTGCCTCATCAACA 5434122
Query 27528 GCGTCTAATTTTTGCTGG 27545
|||||||||||||||
Sbjct 5434123 CTATCTAATTTTTGCTGG 5434140
>seq143
Length=3665815
Score = 89.7 bits (98), Expect = 6e-13
Identities = 108/146 (74%), Gaps = 1/146 (1%)
Strand=Plus/Plus
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | || | | ||||| || |||||||| ||||| ||||||||||| || |||
Sbjct 1819610 GATACAATAGAAACTGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 1819669
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || || |||| |||||||| | |||| ||||| || | ||| | ||
Sbjct 1819670 CAGAGACTGATCTTCTCTGGCAAGCAACTGAAAGATGGACGTACTCTGTCTGAC-ACAAC 1819728
Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611
| ||||| || | ||||| ||||||
Sbjct 1819729 ATTCAAAAAGAGTTCACTCCTCATCT 1819754
>seq6
Length=10791827
Score = 89.7 bits (98), Expect = 6e-13
Identities = 152/222 (68%), Gaps = 15/222 (7%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACT-ATTACTCTTGAGGTTGAGTCAGG 27464
||||| || || | || |||||||| | ||||| || |||| |||||||| |
Sbjct 7744987 ATGCAGATTTTCATGAAAACGCTTACAGAGAAGACCCATCCCTCTCGAGGTTGAACCCTC 7744928
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| || | |||| | ||||| | |||||||| ||||| ||||||||||
Sbjct 7744927 AGATAGAATAGAAAATGTAAAGGCCAGCATTCAGGATAAGGAAGGAATTCCTC------- 7744875
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| || |||||||| |||||||| || |||| ||||| | ||| | |
Sbjct 7744874 -------CTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTGGTCTGACCACAG 7744822
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCG 27626
| |||||||| ||||||||| ||| || ||| | |||||
Sbjct 7744821 CATTCAAAAGGAGTCCACTCTTGGTCTTGTGTTGAGACTTCG 7744780
>seq943
Length=499541
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/131 (75%), Gaps = 4/131 (3%)
Strand=Plus/Minus
Query 27502 AAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGAT 27561
||||| ||||||||||| || |||||| || || |||||||| |||||||| || |||
Sbjct 285821 AAGGAAGGAATTCCTCCTGATCAGCAGATACTGATCTTTGCTGGCAAGCAACTGGAAGAT 285762
Query 27562 GATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621
| ||||| | ||||| | | |||||||| |||| |||||||| || ||| |
Sbjct 285761 GGACGTACTTT----GACTACAGCATTCAAAAGGAGTCCATGCTTCATCTTGTGTTGAGA 285706
Query 27622 CTTCGCGGTGG 27632
|||| |||||
Sbjct 285705 CTTCATGGTGG 285695
>seq91
Length=8299439
Score = 86.0 bits (94), Expect = 7e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184
|||||| |||| | |||||||| ||||| ||| |||||||||||| | | ||||
Sbjct 6129956 ACCATTATCAATTTGGCTCAGAATTTTGTGGGTAGCAATAACCTGAACCTTTTGCAGCCC 6129897
Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244
||| |||||||| || |||| |||||||||||| |||| || | || ||||||
Sbjct 6129896 ATTGGTCAGTTTGGTACTAGGCTGCATGGTGGCAAGGATTCTGCTAGTCCTCGATACATC 6129837
Query 32245 TTCAC 32249
|||||
Sbjct 6129836 TTCAC 6129832
>seq9
Length=9398461
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| | ||| || ||||| || ||||||||||| || || || ||||| ||| | |
Sbjct 525308 AATGCAGAGCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 525249
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | |||| ||||||| || || || || || ||||| | || | |||||
Sbjct 525248 TGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCAGCCCCGCTGACCA 525189
Query 27525 GCAGCGTCTAATTT 27538
||| | || ||||
Sbjct 525188 ACAGAGGCTCATTT 525175
>seq8
Length=10166724
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || || ||||| ||| | ||
Sbjct 8296003 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 8295944
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| | ||||| ||| | || || ||||| || |||||||||||
Sbjct 8295943 GACACCATTGAGAATGTTAAAGCCAAAATCCAAGACAAGGAGGG 8295900
>seq669
Length=845783
Score = 82.4 bits (90), Expect = 9e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184
|||||||| || | |||||||||||||| || || ||| | ||||| || ||||
Sbjct 793773 ACCATTGTGAATTTGGCTCAGAACTTTGTGGGAAGCAACAACATTAACTTGCTTCAGCCT 793714
Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244
||| |||||||| || || || |||||||| |||||||| ||| | ||||| ||
Sbjct 793713 ATTGGTCAGTTTGGAACTCGACTTCATGGTGGCAAAGATGCTGCAAGCCCTCGTTATATT 793654
Query 32245 TTCAC 32249
|||||
Sbjct 793653 TTCAC 793649
>seq30
Length=8731322
Score = 82.4 bits (90), Expect = 9e-11
Identities = 137/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471
||||||| ||||| || || ||||| || || |||||||||||| | |||| | |
Sbjct 1348271 ATCTTTGCAAAGACCCTGGTGGGTAAGACCATCACCCTTGAGGTTGAGCCCAGTGACACC 1348212
Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531
| || ||| | | || ||||| || || |||| | | || || ||||||||| |
Sbjct 1348211 AGTGAGAATGTCGAAGCCAAAATCCAAGATAAGGGTAGCACCCCGCCTGACCAGCAGTAT 1348152
Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591
|| ||||||| || || | || ||||| | || ||||| | ||||| ||| |||
Sbjct 1348151 CTGATTTTTGTGGGCAAAGAGCTGGAGGACGGACGCACCCT--CTGACTACAATAGCCAG 1348094
Query 27592 AAGGAATCCACTCTTCA 27608
|| || ||||| || ||
Sbjct 1348093 AAAGAGTCCACCCTGCA 1348077
>seq1
Length=17255363
Score = 82.4 bits (90), Expect = 9e-11
Identities = 153/225 (68%), Gaps = 5/225 (2%)
Strand=Plus/Minus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
||| || || |||| || ||||| || ||||| || ||||| || |||| | ||
Sbjct 9274298 GCAGATTTTCATCAAAACCCTTACAGGGAAGACCATCACTCTCAAGATTGAACCCTCAGA 9274239
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
|| | |||| | ||||| || ||||||| ||||| |||| | || |||||
Sbjct 9274238 TAAAACAAAAAATGTAAAGGCCAAGATTCAGGGTAAGGAA-----TCCTTCTGATCAGCA 9274184
Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587
| | | |||||||| ||||| || || |||| | ||| | | | ||| || |
Sbjct 9274183 GAAATTGGTCTTTGCTGGCAAGCACCTGGAAGATGGACATACTTTGCCTGGCTACAACAT 9274124
Query 27588 CCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||||||||| |||| ||| || ||| | ||||| |||||
Sbjct 9274123 TCAGAAGGAATCCACCCTTCCTCTTGTGTTGAGACTTCGTGGTGG 9274079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570227783409680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |