Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq136 208 1e-48
>seq136
Length=3786782
Score = 208 bits (230), Expect = 1e-48
Identities = 614/932 (66%), Gaps = 37/932 (4%)
Strand=Plus/Minus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
||||| ||| || |||| |||||||||||||||||||| || ||| |||| |||||
Sbjct 1751543 CCCCTCAGCAAAGAGGAGGCAGAGTTTCCCATCGCCTACTCTATGGTGGTCCATCACAAA 1751484
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
||||| ||| | || | ||||||||||||||||| || || ||||| |||||||| |
Sbjct 1751483 ATCGAAATGCTTGACAGGCTCCTGAGGGCCATCTATGCGCCTCAGAATTTCTACTGCATT 1751424
Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCAT--CCGGGGCGTCTCGGCCATCGCCAGGT 13848
||||||||| ||||| | ||| || | ||| || | | | |||||| |
Sbjct 1751423 CACGTGGACAGAAAGTCGGAGGACTCCTTTTTGGCCGCGGTGATT--GGCATCGCATCCT 1751366
Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908
||||| |||||| | ||||| | |||| | |||||||||| || |||||||
Sbjct 1751365 GCTTCAGTAACGTCTTCGTGGCCAGTCAGCTGGAGAGTGTGGTGTACGCTTCGTGGAGTC 1751306
Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGT 13968
| |||||||||||||||| ||||||| ||||| || | | |||| ||
Sbjct 1751305 GGGTGCAGGCCGACCTCAACTGCATGCAAGACCTCTACAGGATGAAGGCGGACTGGAAGT 1751246
Query 13969 ACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGG 14028
|| || |||| || ||||| ||||| || || | ||||||||| |||| || || |||
Sbjct 1751245 ACTTGATCAATCTTTGCGGTATGGATTTTCCTATTAAGACCAACTTGGAAATTGTCCGGA 1751186
Query 14029 CGCTGAAGGC---CCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGC---CCAACC 14082
||| ||| | | |||| | ||| || ||| || | |||| | |||| |||||
Sbjct 1751185 AGCTCAAGTCGCTCATGGGGGACAACAA---CCTCGAAACCGAGAGGATGCCATCCAACA 1751129
Query 14083 ACAAGCTGCACCGCATCAGGAAGAGGC---ACGTGGTGGCCAGCGGCGGCGTGGTGGTCA 14139
| || | | | |||| | || | ||| | | ||| | || |
Sbjct 1751128 AAAA--AGAA----AGGTGGAAAAAGCATTATAAGGTTGTTA---ACGGAAAGCTGACGA 1751078
Query 14140 ACACCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTT 14199
|||| || | |||| || | ||| || || | ||| | || | || | || |
Sbjct 1751077 ACACAGGGACTGACAAAGCGCAGCCTCCTCTTGAAACACCCCTGTTCTCAGGCAGTGCCT 1751018
Query 14200 ACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC 14259
| || | ||||| || ||| ||||| | ||| || || | || | |
Sbjct 1751017 ATTTCGTGGTCAGTAGGAAGTACGTGGGGTACGTGCTAGAGAATGAAAAAATCCAAAAGT 1750958
Query 14260 TCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGA 14319
||||| | ||| ||||||| |||||||| || ||| | || |||||||| | ||||
Sbjct 1750957 TCATGGAGTGGGCAAAGGACACCTACAGCCCGGATGAGTATCTCTGGGCCACTATTCAGA 1750898
Query 14320 GAATGTACGGGACGCCCGGGGGGATCCCCGT--TCACGTC--AAGTACGACACCTCGGAC 14375
| | | | || | || ||| |||| || | | | | |||||||||| || |||
Sbjct 1750897 GGA--TCCCAGATGTCC--CGGGCTCCCTGTCCTTAAGCCAGAAGTACGACATGTCTGAC 1750842
Query 14376 ATGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGG 14435
||| || | | ||||| ||||||||||| |||| |||||| || | || ||
Sbjct 1750841 ATGCACGCGATCGCGAGGTTTGTCAAGTGGCAGTACTTCGAGGGTGACGTTTCCAAGGGC 1750782
Query 14436 GCCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGC 14495
|||| ||||| || ||| || ||||||| | || | ||| | ||||| ||||
Sbjct 1750781 GCCCCCTACCCACCCTGCAGTGGGGTCCACGTGCGTTCCGTGTGCGTGTTCGGAGCCGGT 1750722
Query 14496 GACGTGAAGTGGCTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACG 14555
||| |||| ||| || || | ||| |||| ||||||||||||||| ||| ||||
Sbjct 1750721 GACTTGAACTGGATGCTTCGCAGGCACCACTTGTTTGCCAACAAGTTCGAC-ACG-GACG 1750664
Query 14556 --GACGAGTTCGCCGTGCGCTGTCTGGACGAG 14585
||| || ||| | | ||| |||| |||
Sbjct 1750663 TTGACCCCTTTGCCATCCAGTGTTTGGATGAG 1750632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658643773392640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |