Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq292 122 8e-23
seq101 120 3e-22
seq694 104 2e-17
seq56 100 2e-16
seq26 93.3 4e-14
seq517 89.7 4e-13
seq695 87.8 2e-12
>seq292
Length=3256830
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||| |||||| | || || || || || || ||
Sbjct 1957967 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1957908
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || ||| ||||| ||||| || || ||||| || ||||| ||
Sbjct 1957907 GACACCATTGAGAACGTTAAAGCCAAAATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 1957848
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || |||||||| ||||||| | || | || ||||||||
Sbjct 1957847 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 1957788
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||| | || ||||| | || | |||||||||||
Sbjct 1957787 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCCGGGGTGGCAT 1957738
>seq101
Length=4626942
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||||||||||| | || || || |||||||||||
Sbjct 1982979 CATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATAACCCTGGAAGTGGAACCCAG 1982920
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | || || || || || || || || ||||| || || || ||
Sbjct 1982919 CGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCA 1982860
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | |||||||| || ||||||| | || |||| ||||||||
Sbjct 1982859 GCAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 1982800
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| ||||| ||||| ||| | ||| |||| |||| || | ||||||||
Sbjct 1982799 CATCCAAAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGAGGTGGCAT 1982749
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||||||||||| | || || || |||||||||||
Sbjct 1982751 CATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAG 1982692
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | || || || || || || || || ||||| || || || ||
Sbjct 1982691 TGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCA 1982632
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | |||||||| || ||||||| | || |||| ||||||||
Sbjct 1982631 GCAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 1982572
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| || | ||| |||| |||| || ||||||||||
Sbjct 1982571 CATCCAGAAAGAGTCCACTCTGCATCTGGTCCTGCGCCTGAGGGGTGGCAT 1982521
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||| |||||| | || || || || ||||||||
Sbjct 1983206 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAACCCAGT 1983147
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || ||||| || || ||||| || || || ||
Sbjct 1983146 GACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAG 1983087
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||||| || ||||||| | || |||| |||||||||
Sbjct 1983086 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1983027
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||| | ||| |||| |||| || ||||||||||
Sbjct 1983026 ATCCAGAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGGGGTGGCAT 1982977
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||||||||||| | || || || ||||| || ||
Sbjct 1982523 CATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAAGTAGAGCCCAG 1982464
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || || | || || || || ||||| || || ||||| || || || ||
Sbjct 1982463 TGATACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCA 1982404
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| || ||||||| | || |||| ||||||||
Sbjct 1982403 GCAGAGGCTTATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 1982344
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| || || |||||||| | || ||||| | ||| || ||||||||
Sbjct 1982343 CATCCAGAAAGAGTCGACTCTCCACCTGGTTCTTCGTCTGAGGGGTGGC 1982295
>seq694
Length=814564
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || |||||||| || ||||| ||
Sbjct 212379 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTTGAGGTTGAACCCTCG 212320
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||| || || ||||| || || || |||||
Sbjct 212319 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 212260
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | |||| | || ||||| ||| ||||||| | || | || || ||||||
Sbjct 212259 CAGAGACTAATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 212200
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||| |||| || | ||| | || ||| | | || |||||
Sbjct 212199 ATTCAAAAGTAGTCCACTCTTCATCTTGTGTTGAGACTCCGTGGTGG 212153
>seq56
Length=5723395
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||||||||| | || || || || ||||| ||
Sbjct 4239155 CATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 4239096
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| |||||| || || ||||| ||||| ||||| || || || ||
Sbjct 4239095 TGACACCATCGAGAACGTCAAAGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCTGACCA 4239036
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || || ||||| ||||||| | ||| | || || |||||
Sbjct 4239035 GCAGAGGCTGATCTTTGCAGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 4238976
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| || |||||||| || | || | || |||| ||| |||| ||
Sbjct 4238975 CATCCAGAAGGAGTCCACTCTGCACCTCGTCCTGCGCTTGAGGGGCGG 4238928
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||||||||| | || || || || ||||| ||
Sbjct 4239611 CATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 4239552
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || |||||||| ||||| || || || ||
Sbjct 4239551 TGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCA 4239492
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || || ||||| ||||||| | ||| | || || |||||
Sbjct 4239491 GCAGAGGCTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 4239432
Query 27167 CATTCAAAAGGAGTCGAC 27184
||| || |||||||| ||
Sbjct 4239431 CATCCAGAAGGAGTCCAC 4239414
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||||||||| | || || || || ||||| ||
Sbjct 4239383 CATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 4239324
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| ||||| || || || |||||||| ||||| || || || ||
Sbjct 4239323 TGACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCA 4239264
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || || ||||| ||||||| | ||| | || || |||||
Sbjct 4239263 GCAGAGGCTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 4239204
Query 27167 CATTCAAAAGGAGTCGAC 27184
|| || |||||||| ||
Sbjct 4239203 TATCCAGAAGGAGTCCAC 4239186
>seq26
Length=7528108
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/200 (71%), Gaps = 3/200 (2%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| | ||||| || || || ||| | || ||||| | || ||||| ||
Sbjct 6810586 ATGCAGATATTCATGAAAACCCTAACGGGGAAGACCATCACTCTCAAGGTTGAACCCTCG 6810645
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||| || || ||||| || || ||||||||
Sbjct 6810646 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCCGATCAG 6810705
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA---CAGTTCGACCGTTTCCGATTAC 27164
||| | | || | || ||||| ||| ||||||| || | || | || || |||
Sbjct 6810706 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTACTTTGTCTGACTAC 6810765
Query 27165 AACATTCAAAAGGAGTCGAC 27184
||||||||||||||||| ||
Sbjct 6810766 AACATTCAAAAGGAGTCCAC 6810785
>seq517
Length=1171097
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || ||||| || || ||||| ||
Sbjct 1142414 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 1142473
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||| || || ||||| || || || |||||
Sbjct 1142474 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 1142533
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| ||| ||||||| | || | || | ||||||
Sbjct 1142534 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTAACTACAAC 1142593
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||||||| || | ||| | || ||| | | || |||||
Sbjct 1142594 TTTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTCCGTGGTGG 1142640
>seq695
Length=815165
Score = 87.8 bits (96), Expect = 2e-12
Identities = 157/228 (69%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTA-AAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||||| || || ||||| || || || ||| | || ||||| || || ||||| ||
Sbjct 16683 ATGCAGATTTTCGTTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 16742
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || || | || || || ||||| || || ||||| || || || |||||
Sbjct 16743 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 16802
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| | | ||||||| | || | || || |||||
Sbjct 16803 GCAGAGACTGATCTTTGCTGGCAAGCCACTGGAAGATGGACGTACTTTGTCTGACTACAA 16862
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||||||||| || | ||| | || ||| | | || |||||
Sbjct 16863 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTCCGTGGTGG 16910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434855396633280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |