Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_029119.1
Length=127726
Score E
Sequences producing significant alignments: (Bits) Value
seq1753 105 5e-18
>seq1753
Length=106182
Score = 105 bits (116), Expect = 5e-18
Identities = 299/451 (66%), Gaps = 14/451 (3%)
Strand=Plus/Plus
Query 87419 ACATAAGTTAGACATTTTGATTTCACCAAGCTCATTTAAAGCATGGTTTTTGTTTGCGTT 87478
||| || ||| |||||| |||| || || ||||| | || | ||||||||||||
Sbjct 73120 ACACAAATTACTCATTTTTATTTTTCCCAGGCGCTTTAAGGGATTTTGTTTGTTTGCGTT 73179
Query 87479 ATCTTTATACATGATATAAGGATAACCAGATTGTAATTGAATTTGAGCGATCAGATTTAA 87538
||| | | || | ||||||||| || |||| || || ||||||| || | | ||
Sbjct 73180 ATCAATGAAAATCACATAAGGATACCCTGATTCGAACTGGGTTTGAGCTATTTTAGTCAA 73239
Query 87539 CATTTCTCTAGCA-TTAATTTTATGTTTGATAACATTTTCATTCTCAACGAACTTGTCAT 87597
|| |||||| ||| | | | || || || || || ||| || | |||||||
Sbjct 73240 GATACTCCTAGCAGATAACTCTTTTTTCAGTATCA-TTGGATCCTCGACAAGTTTGTCAT 73298
Query 87598 ACCAATCATTAATATTAATGTCATCTAAGATTACATCTTTACCGAATTCTTCTTGAATTG 87657
| || |||| || ||| | || | ||||| | ||| || || | |||||
Sbjct 73299 ATCATTCATCAAAATTGAGATC-TGAAAGATAA-----ACACCATATCTTTGATAAATTG 73352
Query 87658 AGTATGGTTCAAACATATATAAGTCTTTGTCTTCTTTTGCTAAAT-CAAAGAATAATGAA 87716
|| |||||| || ||| | || | ||| || |||||||| || | |||| | | || |
Sbjct 73353 TGTTTGGTTCGAAAATACAAAAATTTTTATCATCTTTTGCCAACTGCAAAAACTTAT-CA 73411
Query 87717 GGAACAATTAAACCGATTGAAAGTGTAGCTAAACGTGTATCTTCATCTGCATTAACTTTC 87776
|||| |||||| || ||||| ||||| | | | | |||||||||||| | |||
Sbjct 73412 GGAATAATTAATCCTATTGAGAGTGTTTGGATTCTAGACTTTTCATCTGCATTGATTTTT 73471
Query 87777 TTAGTGTTTAATAACTCAATTACATCTGAGTGGAAAATGTTTAAGTAAGCAGCACCAGCT 87836
||| || | || ||||||| || |||| ||||| | | ||||| || ||| |
Sbjct 73472 TTACAGTCAATAAAGTCAATTAAGTCGTAGTGAAAAATACTAAGATAAGCTGCGCCACTT 73531
Query 87837 C--CAGCACGTTGACCTAATTGATCAGCATA 87865
| | | | || || |||||||| |||||
Sbjct 73532 CCTCGCCTCATT--CCCAATTGATCTGCATA 73560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408540689178923
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |