Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02- 28] 11,589 sequences; 2,342,939,051 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq1753 105 5e-18 >seq1753 Length=106182 Score = 105 bits (116), Expect = 5e-18 Identities = 299/451 (66%), Gaps = 14/451 (3%) Strand=Plus/Plus Query 87419 ACATAAGTTAGACATTTTGATTTCACCAAGCTCATTTAAAGCATGGTTTTTGTTTGCGTT 87478 ||| || ||| |||||| |||| || || ||||| | || | |||||||||||| Sbjct 73120 ACACAAATTACTCATTTTTATTTTTCCCAGGCGCTTTAAGGGATTTTGTTTGTTTGCGTT 73179 Query 87479 ATCTTTATACATGATATAAGGATAACCAGATTGTAATTGAATTTGAGCGATCAGATTTAA 87538 ||| | | || | ||||||||| || |||| || || ||||||| || | | || Sbjct 73180 ATCAATGAAAATCACATAAGGATACCCTGATTCGAACTGGGTTTGAGCTATTTTAGTCAA 73239 Query 87539 CATTTCTCTAGCA-TTAATTTTATGTTTGATAACATTTTCATTCTCAACGAACTTGTCAT 87597 || |||||| ||| | | | || || || || || ||| || | ||||||| Sbjct 73240 GATACTCCTAGCAGATAACTCTTTTTTCAGTATCA-TTGGATCCTCGACAAGTTTGTCAT 73298 Query 87598 ACCAATCATTAATATTAATGTCATCTAAGATTACATCTTTACCGAATTCTTCTTGAATTG 87657 | || |||| || ||| | || | ||||| | ||| || || | ||||| Sbjct 73299 ATCATTCATCAAAATTGAGATC-TGAAAGATAA-----ACACCATATCTTTGATAAATTG 73352 Query 87658 AGTATGGTTCAAACATATATAAGTCTTTGTCTTCTTTTGCTAAAT-CAAAGAATAATGAA 87716 || |||||| || ||| | || | ||| || |||||||| || | |||| | | || | Sbjct 73353 TGTTTGGTTCGAAAATACAAAAATTTTTATCATCTTTTGCCAACTGCAAAAACTTAT-CA 73411 Query 87717 GGAACAATTAAACCGATTGAAAGTGTAGCTAAACGTGTATCTTCATCTGCATTAACTTTC 87776 |||| |||||| || ||||| ||||| | | | | |||||||||||| | ||| Sbjct 73412 GGAATAATTAATCCTATTGAGAGTGTTTGGATTCTAGACTTTTCATCTGCATTGATTTTT 73471 Query 87777 TTAGTGTTTAATAACTCAATTACATCTGAGTGGAAAATGTTTAAGTAAGCAGCACCAGCT 87836 ||| || | || ||||||| || |||| ||||| | | ||||| || ||| | Sbjct 73472 TTACAGTCAATAAAGTCAATTAAGTCGTAGTGAAAAATACTAAGATAAGCTGCGCCACTT 73531 Query 87837 C--CAGCACGTTGACCTAATTGATCAGCATA 87865 | | | | || || |||||||| ||||| Sbjct 73532 CCTCGCCTCATT--CCCAATTGATCTGCATA 73560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408540689178923