Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq694 131 1e-25
seq695 129 4e-25
seq517 127 1e-24
seq26 113 3e-20
seq292 111 1e-19
seq108 100 2e-16
seq101 95.1 8e-15
seq1820 84.2 1e-11
>seq694
Length=814564
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| ||||| || || |||||||| || ||||| || ||
Sbjct 212379 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTTGAGGTTGAACCCTCG 212320
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | |||| |||| || ||| || || ||||| | || || |||||
Sbjct 212319 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 212260
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | |||| ||||| ||||| ||||||||||| | ||| ||||| || ||||||
Sbjct 212259 CAGAGACTAATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 212200
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|| ||||| ||||||| | ||| | || || ||
Sbjct 212199 ATTCAAAAGTAGTCCACTCTTCATCTTGTGTTGAG 212165
>seq695
Length=815165
Score = 129 bits (142), Expect = 4e-25
Identities = 159/216 (74%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTT-AAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||||||||| |||||||| ||||| || || ||||||||||| ||||| || |
Sbjct 16683 ATGCAGATTTTCGTTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 16742
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||| || | |||| |||| || ||| || || ||||| | || || |||||
Sbjct 16743 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 16802
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| ||||| | ||||||||| | ||| ||||| || |||||
Sbjct 16803 GCAGAGACTGATCTTTGCTGGCAAGCCACTGGAAGATGGACGTACTTTGTCTGACTACAA 16862
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||| ||||| |||||||| | ||| | || || ||
Sbjct 16863 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 16898
>seq517
Length=1171097
Score = 127 bits (140), Expect = 1e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| ||||| || || ||||||||||| ||||| || ||
Sbjct 1142414 ATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 1142473
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | |||| |||| || ||| || || ||||| | || || |||||
Sbjct 1142474 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 1142533
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| ||||| ||||||||||| | ||| ||||| | ||||||
Sbjct 1142534 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTAACTACAAC 1142593
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| ||||| |||||||| | ||| | || || ||
Sbjct 1142594 TTTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 1142628
>seq26
Length=7528108
Score = 113 bits (124), Expect = 3e-20
Identities = 147/201 (73%), Gaps = 3/201 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||| | |||||||| ||||| || || ||||||||| | ||||| || |
Sbjct 6810585 AATGCAGATATTCATGAAAACCCTAACGGGGAAGACCATCACTCTCAAGGTTGAACCCTC 6810644
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||| || | |||| |||| || ||| || || ||||| | || || |||||
Sbjct 6810645 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCCGATCA 6810704
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT--TTAGGC-GATTA 23786
||| | | || ||||| ||||| ||||||||||| | | | ||| || | | || ||
Sbjct 6810705 GCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTACTTTGTCTGACTA 6810764
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| ||||| ||||||||
Sbjct 6810765 CAACATTCAAAAGGAGTCCAC 6810785
>seq292
Length=3256830
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| ||||| || || ||||| ||||| || || |||
Sbjct 1957967 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1957908
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| || ||||| | |||| | || || || || | || || || ||
Sbjct 1957907 GACACCATTGAGAACGTTAAAGCCAAAA-TCCAAGATAAGGAGGGCATCCCCCCCGACCA 1957849
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| |||||||| |||||||| | |||||| | ||||||||
Sbjct 1957848 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGATTACAA 1957789
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 1957788 TATCCAGAAAGAGTCCAC 1957771
>seq108
Length=4373546
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||||||||| || |||||||| ||||| || || |||||||| || | ||| |||
Sbjct 1070665 AAGATGCAGATTTTTGTGAAAACCCTTACGGGGAAGACCATCACTCTTGAGGCTGAATCC 1070606
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || | || |||| |||| || || || || ||||| | || || ||
Sbjct 1070605 TCAGATAGAGTAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTAAT 1070546
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | || || || || ||||| ||||||| ||| | ||| ||| | | || |||
Sbjct 1070545 CAGCAGAGATTGATCTTGGCTGGCAAGCAACTGGCAGATGGACGAACTCTGTGGGACTAC 1070486
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| ||| ||||| ||| |||| | ||| | || || ||
Sbjct 1070485 AGCATTCAAAAGGAGGCCACTCTTCATCTTGTGTTGAG 1070448
>seq101
Length=4626942
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || ||||| || |||
Sbjct 1982750 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAACCCAGT 1982691
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | |||| | || || || || || || || | || || || ||
Sbjct 1982690 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982631
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||||||||| || |||||||| | |||||| | |||||||||
Sbjct 1982630 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982571
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 1982570 ATCCAGAAAGAGTCCAC 1982554
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || || || || ||||| || |||
Sbjct 1982978 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATAACCCTGGAAGTGGAACCCAGC 1982919
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | |||| | || || || || || || || | || || || ||
Sbjct 1982918 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982859
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||||||||| || |||||||| | |||||| | |||||||||
Sbjct 1982858 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982799
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||||||||||||
Sbjct 1982798 ATCCAAAAAGAGTCCAC 1982782
Score = 95.1 bits (104), Expect = 8e-15
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| || ||||| || || || || ||||| || || || || ||
Sbjct 1983209 AAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTGGAACCC 1983150
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | |||| | || || || || || || || | || || ||
Sbjct 1983149 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATCCCCCCTGAC 1983090
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||||||||| || |||||||| | |||||| | ||||||
Sbjct 1983089 CAGCAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 1983030
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || |||||||||||
Sbjct 1983029 AACATCCAGAAAGAGTCCAC 1983010
>seq1820
Length=90317
Score = 84.2 bits (92), Expect = 1e-11
Identities = 142/202 (70%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| || || || || || || || ||||| || || || || ||
Sbjct 66752 AAAATGCAGATTTTCGTGAAGACACTGACTGGCAAGACCATCACCCTGGAGGTGGAACCC 66811
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTA-CCGCCA-G 23725
| ||||| | |||| | || || || || ||||| ||| | ||||| |
Sbjct 66812 AGTGACACAATCGAAACTGTGAAGGCCAAGATCCAAGATAAAGA--GTGCATCCGCCCCG 66869
Query 23726 ATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATT 23785
| || ||| | | || ||||||||||| || |||||||| | |||||| | ||||
Sbjct 66870 ACCAGCAGAGGCTTATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATT 66929
Query 23786 ACAACATACAAAAAGAGTCCAC 23807
||||| | || |||||||| ||
Sbjct 66930 ACAACCTCCAGAAAGAGTCGAC 66951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337961859207212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |