Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq185 172 4e-38
seq32 105 5e-18
seq170 87.8 1e-12
>seq185
Length=3693041
Score = 172 bits (190), Expect = 4e-38
Identities = 137/165 (83%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || |||| ||| || |||||||| ||||| || | ||||||||||||||| ||||||
Sbjct 3389791 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 3389732
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || ||||||||||| ||||||||||| |||||||| || ||||| || | |
Sbjct 3389731 ACGCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 3389672
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
||||| ||||| || | |||||||||||||||||||||||| |||
Sbjct 3389671 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGAAGGGCCATCAGA 3389627
>seq32
Length=10841312
Score = 105 bits (116), Expect = 5e-18
Identities = 165/235 (70%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCT 114321
||||||||| || || || || || || ||||||||||||| || | || || |
Sbjct 10199710 ATGAGCTCCTTGTGGAGGTTCCTTGAGATCTCTGCTGAGGACTAAATTAATTCTATCCTT 10199769
Query 114322 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 114381
| ||||| |||||| || || || |||||||| ||||| |||||||| ||||||| ||
Sbjct 10199770 TAAAGGTCGATTCTTCTCAGGAATAGAGAACCATGTCTTCCTACCCATAATCACCAAATT 10199829
Query 114382 CTGCTTACCTCTGTCGGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 114441
||| |||||| | || || || | ||||| | | || || || || ||
Sbjct 10199830 CTGTTTACCTTCTACTGAGGAGGTTGTGGTCATTCTTTGGAAAAACTTGAATTCATT--- 10199886
Query 114442 AAGTCTCACCGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGG 114495
|| | ||| |||| ||||| || ||||| || |||||||||||| |||||
Sbjct 10199887 ---CCTGAGCGGGGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTCTGG 10199938
>seq170
Length=3340629
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| || || ||||||||||||| || | || || | | ||||| |||||| || ||
Sbjct 2842989 TTGAGATCTCTGCTGAGGACTAAATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGA 2843048
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|| |||||||| ||||| |||||||| ||||||| ||||| ||||||
Sbjct 2843049 ATAGAGAACCATGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 2843096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406105833128854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |