Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq185 156 3e-33
>seq185
Length=3693041
Score = 156 bits (172), Expect = 3e-33
Identities = 133/164 (81%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || |||| ||| || |||||||| ||||| || | ||||||||||||||| |||||
Sbjct 3389791 AGGCCTGTGATGTGTGCAATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 3389732
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || || ||||||||||||||||||||||| ||||| || || ||||| ||||
Sbjct 3389731 ACGCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACC 3389672
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
||||| ||||| || | ||| |||||||||||||| ||||| ||
Sbjct 3389671 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGAAGGGCCATCAG 3389628
Score = 82.4 bits (90), Expect = 6e-11
Identities = 96/130 (74%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 27497 TGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 27556
|||| ||||| || ||||||||||| || || || || || || || | || || ||||
Sbjct 3386775 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTT 3386716
Query 27557 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616
| |||| ||| ||| ||||||| ||||||| || || ||||| |||||||| |
Sbjct 3386715 CTCTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTT 3386656
Query 27617 TTACCCCCTT 27626
| || |||||
Sbjct 3386655 TCACTCCCTT 3386646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369455010456659
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |