Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq101 132 1e-25
seq56 132 1e-25
seq694 125 2e-23
seq695 118 2e-21
seq517 116 9e-21
seq1820 113 1e-19
seq26 105 2e-17
seq108 96.9 8e-15
>seq101
Length=4626942
Score = 132 bits (146), Expect = 1e-25
Identities = 159/215 (74%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| ||||| |||||||| |||||||||||||| | | ||| | ||||||
Sbjct 1982539 AGGACCAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1982598
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| || ||||||||||||||||| | | ||| || ||||| ||
Sbjct 1982599 TCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 1982658
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| | || | | |||| ||| || ||||| || || ||
Sbjct 1982659 TGGATCTTGGCCTTCACATTTTCGATGGTGTC---ACTGGGTTCCACTTCCAGGGTGATG 1982715
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || ||||||||||||| ||||||
Sbjct 1982716 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982750
Score = 132 bits (146), Expect = 1e-25
Identities = 161/218 (74%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| || || |||||||| |||||||||||||| | | ||| | ||||||
Sbjct 1982995 AGGACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1983054
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| || ||||||||||||||||| | | ||| || ||||| |||
Sbjct 1983055 TCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 1983114
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| | || | | |||| ||| || || || || || ||
Sbjct 1983115 TGGATCTTGGCCTTCACATTTTCGATGGTGTC---ACTGGGTTCCACCTCCAGGGTGATG 1983171
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| ||||| || || ||||||||||||| |||||||||
Sbjct 1983172 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTT 1983209
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| || || ||||||||||||||||||||||| | | ||| | ||||||
Sbjct 1982767 AGGACCAGATGCAGGGTGGACTCTTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1982826
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| || ||||||||||||||||| | | ||| || ||||| ||
Sbjct 1982827 TCCAGCTGCTTGCCGGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 1982886
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || ||| | || | | |||| || ||||| || || || ||
Sbjct 1982887 TGGATCTTGGCCTTCACATTTTCGATGGTGTCGCTGGGTTCCACTTCCAGGGTTATGGTC 1982946
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || || ||||||||||||| ||||||
Sbjct 1982947 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982978
Score = 127 bits (140), Expect = 5e-24
Identities = 158/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || ||||| |||||||| |||||||||||||| | | ||| | ||||||
Sbjct 1982311 AGAACCAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1982370
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || || ||||||||||||||||| | | ||| || ||||| |||
Sbjct 1982371 TCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCT 1982430
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| | || | | | || ||| ||||||||| || || ||
Sbjct 1982431 TGGATCTTGGCCTTCACATTTTCGATGGTATC---ACTGGGCTCTACTTCTAGGGTGATG 1982487
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || ||||||||||||| ||||||
Sbjct 1982488 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1982522
>seq56
Length=5723395
Score = 132 bits (146), Expect = 1e-25
Identities = 159/215 (74%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || ||||| ||||| || ||||||||||| || | | || | |||||||
Sbjct 4238943 AGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 4239002
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || |||||| || ||||| |||||||||||||| | | ||| || || ||||||
Sbjct 4239003 TCCAGCTGTTTCCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCT 4239062
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || |||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 4239063 TGGATCTTCCCTTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 4239119
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || | ||||||||||||| ||||||
Sbjct 4239120 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239154
Score = 116 bits (128), Expect = 9e-21
Identities = 161/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || ||||| ||||| || ||||| ||||| || | | ||
Sbjct 4239162 CTGAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGACAGGGTG 4239221
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || |||||| || ||||| |||||||||||||| | | ||| ||
Sbjct 4239222 CGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCC 4239281
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || || || || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 4239282 TCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 4239338
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || | ||||||||||||| ||||||
Sbjct 4239339 AGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239382
Score = 116 bits (128), Expect = 9e-21
Identities = 161/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || || || ||||| || ||||||||||| || | | ||
Sbjct 4239390 CTGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 4239449
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || |||||| || ||||| |||||||||||||| | | ||| ||
Sbjct 4239450 CGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCC 4239509
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || || || || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 4239510 TCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 4239566
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || | ||||||||||||| ||||||
Sbjct 4239567 AGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4239610
Score = 114 bits (126), Expect = 3e-20
Identities = 161/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || || || ||||| || ||||||||||| || | | ||
Sbjct 4239618 CTGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 4239677
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || |||||| || ||||| |||||||||||||| | | ||| ||
Sbjct 4239678 CGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCC 4239737
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || || || || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 4239738 TCTTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 4239794
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || || || || | ||||||||||||| |||||||
Sbjct 4239795 AGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATT 4239839
>seq694
Length=814564
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
|||||| | |||||||||||||| |||| ||||| |||||||| || | ||||| |
Sbjct 212161 GAGTCTCAACACAAGATGAAGAGTGGACTACTTTTGAATGTTGTAGTCAGACAAAGTACG 212220
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || || || ||||| || |||||||| || | | ||||||||
Sbjct 212221 TCCATCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTCTGCTGATCAGGAGGAATTCCTTC 212280
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || || ||| | |||| | || || || || ||||||||
Sbjct 212281 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCAAGAGT 212340
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || |||||||| | ||||||
Sbjct 212341 GATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 212379
>seq695
Length=815165
Score = 118 bits (130), Expect = 2e-21
Identities = 159/220 (72%), Gaps = 1/220 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
|||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| |
Sbjct 16902 GAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACG 16843
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || || || ||||| || |||||||| || | | ||||||||
Sbjct 16842 TCCATCTTCCAGTGGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 16783
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || || ||| | |||| | || || || || || |||||
Sbjct 16782 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGT 16723
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTC-ACGAAGACCTGCAT 152104
|| || || ||||| || || ||| ||||| | ||||||
Sbjct 16722 GATGGTCTTCCCCGTTAGGGTTTTCAACGAAAATCTGCAT 16683
>seq517
Length=1171097
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
|||||| | |||||||||||||| ||||| ||||| | |||||| | | ||||| |
Sbjct 1142632 GAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAAAGTTGTAGTTAGACAAAGTACG 1142573
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || || || ||||| || |||||||| || | | ||||||||
Sbjct 1142572 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 1142513
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || || ||| | |||| | || || || || || |||||
Sbjct 1142512 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGT 1142453
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || |||||||| | ||||||
Sbjct 1142452 GATGGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCAT 1142414
>seq1820
Length=90317
Score = 113 bits (124), Expect = 1e-19
Identities = 159/222 (72%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
|| ||| || || || ||||| |||||||| |||| ||||||||| | | ||| | ||
Sbjct 66970 TCAGAGTACCAGGTGGAGAGTCGACTCTTTCTGGAGGTTGTAATCAGAAAGAGTGCGGCC 66911
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
|||||| || || ||||| |||||||||||||||||||| | ||| | || ||
Sbjct 66910 ATCTTCCAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCGGGGCGGATGCACTCTTT 66851
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGT 152065
||||| || || || ||||| || | |||| ||| || || || || ||
Sbjct 66850 ATCTTGGATCTTGGCCTTCACAGTTTCGATTGTGTC---ACTGGGTTCCACCTCCAGGGT 66794
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || ||||| || || ||||||||||| | |||||||||
Sbjct 66793 GATGGTCTTGCCAGTCAGTGTCTTCACGAAAATCTGCATTTT 66752
>seq26
Length=7528108
Score = 105 bits (116), Expect = 2e-17
Identities = 157/222 (71%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | ||||| |||||||| ||||| ||||| |||||||| || | ||||| |
Sbjct 6810806 AGTCTCAACACAAGCTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAGTA 6810747
Query 151947 C---CATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||| || || || || ||||| ||||||||||| || | | ||||||
Sbjct 6810746 CATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATTCCT 6810687
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || ||||| || || ||| | |||| | || || || || | |||
Sbjct 6810686 TCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTTGAGA 6810627
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || ||||| || || |||| ||| | |||||||
Sbjct 6810626 GTGATGGTCTTCCCCGTTAGGGTTTTCATGAATATCTGCATT 6810585
>seq108
Length=4373546
Score = 96.9 bits (106), Expect = 8e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| | ||| ||||| ||| |||| || | |||||
Sbjct 1070445 AGTCTCAACACAAGATGAAGAGTGGCCTCCTTTTGAATGCTGTAGTCCCACAGAGTTCGT 1070504
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||| | || || || || ||||| | |||||||| | | | |||||||||
Sbjct 1070505 CCATCTGCCAGTTGCTTGCCAGCCAAGATCAATCTCTGCTGATTAGGAGGAATTCCTTCC 1070564
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || || | ||||| || ||||| || | ||||||||
Sbjct 1070565 TTATCCTGGATCTTGGCCTTTACGTTTTCTACTCTATCTGAGGATTCAGCCTCAAGAGTG 1070624
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||||| || || ||||| || | |||||| ||
Sbjct 1070625 ATGGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCATCTT 1070665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153649476000219
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |