Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq101 93.3 4e-14
seq292 89.7 4e-13
>seq101
Length=4626942
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || || || || || |||||||||| ||||| ||| ||||| ||||||||||
Sbjct 1982978 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATAACCCTGGAAGTGGAACCCAGC 1982919
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | | | | || || || || || || || ||| | ||| || ||
Sbjct 1982918 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 1982859
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| |||||||||| ||| ||||| || |||||||| ||| | | ||||| ||
Sbjct 1982858 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1982799
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
|| |||||||| || || || ||| | || |||| ||| | |||||||
Sbjct 1982798 ATCCAAAAAGAGTCCACCCTGCATCTGGTCCTGCGCCTGAGAGGTGGCA 1982750
>seq292
Length=3256830
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| || ||||| || || |||| ||||| ||||| ||| | || || |||||
Sbjct 1957967 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1957908
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| | ||| | || ||| ||||| || || || ||| | ||| ||| ||
Sbjct 1957907 GACACCATTGAGAACGTTAAAGCCAAAATCCAAGATAAGGAGGGCATCCCCCCCGACCAG 1957848
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| | || |||| |||||||||||| |||||||| ||| || | ||||| |||
Sbjct 1957847 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCTGATTACAAT 1957788
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATA 111331
|| || ||||| || || || || || ||| | || || || ||||||| ||
Sbjct 1957787 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCCGGGGTGGCATTA 1957736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421751622990664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |