Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ailurus_20fulgens_20styani_20[genbank_20GCA_5F002007465.1_202017-02-
28] 11,589 sequences; 2,342,939,051 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1646 89.7 5e-13
seq501 89.7 5e-13
seq730 86.0 7e-12
seq15 82.4 8e-11
>seq1646
Length=128628
Score = 89.7 bits (98), Expect = 5e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| ||||||| |||| ||||||||
Sbjct 68574 CTCCTGGGCTCAAGCAATCCTCCTGCCTCAGCCTCCTGAGTAGCGGGGACTACAGGCACG 68515
Query 8465 AGCCACCACGCCAAGCT 8481
||||||||||| ||||
Sbjct 68514 CGCCACCACGCCCAGCT 68498
>seq501
Length=1205937
Score = 89.7 bits (98), Expect = 5e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||
Sbjct 1030841 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCG 1030900
Query 8465 AGCCACCACGCCAAGCTAATTTTT 8488
|||||| |||| |||| ||||||
Sbjct 1030901 CGCCACCGCGCCCAGCTTATTTTT 1030924
>seq730
Length=768310
Score = 86.0 bits (94), Expect = 7e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 8537 GAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC 8596
||||||||| |||| | ||||| |||||||| ||||||||| ||||||| ||||||
Sbjct 214547 GAACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGT 214606
Query 8597 ATGAGCCACCGCGCCTGGCCCT 8618
|| ||||||||||||||| ||
Sbjct 214607 GTGCGCCACCGCGCCTGGCTCT 214628
>seq15
Length=13258014
Score = 82.4 bits (90), Expect = 8e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||||
Sbjct 11367650 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 11367709
Query 8465 AGCCACCACGCCAAGCTAATTTT 8487
|||||| |||| || |||||
Sbjct 11367710 CGCCACCGCGCCCGGCAGATTTT 11367732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521412455944600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |