Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq2619 87.8 3e-12 >seq2619 Length=11042 Score = 87.8 bits (96), Expect = 3e-12 Identities = 154/221 (70%), Gaps = 9/221 (4%) Strand=Plus/Plus Query 205450 TGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTA--AAC 205507 || || ||||||| ||| | | | ||||||||||| ||| || || ||||| | || Sbjct 2374 TGCGCCATCATATGAGTAAGAAGAGCATAACTAGCAATATTGAAAGGAACACCAAGAAAG 2433 Query 205508 CCATATCAGCTGATCTTTGATACATTTGACATGTAAGATA-TTTATTATTAATTACATGA 205566 ||| ||||| || ||||||| || || ||||| ||| ||||||| ||||| | Sbjct 2434 ACATCACAGCT--TCGCTGATACAACTGGCA----AGATAATTTGTTATTAACTACATAA 2487 Query 205567 AATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAG 205626 || || | || | ||||||||| | || |||| || |||| ||| | ||||||| Sbjct 2488 AACTGGAAAAGAGCATGACAAGGAGCTAATGCCATCTTATCAATTTCTCCGGCATTCCAG 2547 Query 205627 GCTGTTAATATTATATTTCTAGATTCAGGTTTATTTTTTAT 205667 |||| | || || ||| || ||||| || || ||||| Sbjct 2548 GCTGAAACGATGATCCGTCTGGAATCAGGATTGTTCTTTAT 2588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755407849123200