Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq2964 168 1e-36 >seq2964 Length=2227 Score = 168 bits (186), Expect = 1e-36 Identities = 464/709 (65%), Gaps = 23/709 (3%) Strand=Plus/Minus Query 7757 GGCGATATTCATTTTCACGACCTTGATTATAGCCCACTATTCCCGCAATTCAACTGTATG 7816 || || || ||||||||||| || || ||| || | |||||| |||||||||||| Sbjct 1729 GGGGAGATCCATTTTCACGATCTCGACTATTCACCGTTCTTCCCGATGTTCAACTGTATG 1670 Query 7817 CTTATCGACATCAAGGGGATGTTCGAAGGTGGGTTCAAAATGGGTAACGCTGAAATTGAA 7876 || ||||| || || ||| | ||| | || ||||| |||||||| || ||||| ||| Sbjct 1669 CTGATCGATGTCGGCGGAATGCTGGAACGCGGTTTCAAGATGGGTAATGCCGAAATCGAA 1610 Query 7877 GAGCCAAAT---AGCATTGCGACTGCTGCGACTATCGTAACTCAGATCATTCAGCAAGTA 7933 || || | || | | | | ||| || || | |||||||| || || Sbjct 1609 TCACCTAAGTCAATCAGTACCGCAACCGCGGTTACCGCA---CAGATCATCGCCCAGGTT 1553 Query 7934 AGCAGCCACATCTATGGCGGCAACACAATCAATCGCATCGACGAAGTGCTTGCTCCTTAT 7993 |||||| ||||| ||||| | || ||||| ||| || || |||||||| || ||| Sbjct 1552 GCCAGCCATATCTACGGCGGTACAACCATCAACCGCTGTGATGAGGTGCTTGCCCCGTAT 1493 Query 7994 GTTCGCAAGTCGTACTACAAATGGTTAGAAATCGGTCGAGAAGA---ACAT-CCAGATTC 8049 ||| |||| | | || | | |||| || |||| || |||| || ||| | Sbjct 1492 GTTACCAAGAGTTTCATGAAGTA-TCAGAAGATGGCCGAGGAGTGGCACATTCCTGATCC 1434 Query 8050 AGATTCAAAAGCCGCGATCTTTGCTCGTAAACGTGTTGAGAAAGAAACGTATGATGCGTT 8109 || | |||||| || ||| ||| || || ||||| || || Sbjct 1433 GGAC------------AGCTTTGCCCGAGCCCGTACTGAAAAGGAGTGCTATGACGCCTT 1386 Query 8110 TCAGACTTTTGAATACCAAGTCAATACAATGCAGACTTCAAATGGTCAGACACCATTCAC 8169 ||| || ||||||| |||| || || |||| || || || |||||||| || ||| Sbjct 1385 CCAGTCTCTTGAATATGAAGTAAACACCCTGCATACCTCCAACGGTCAGACTCCGTTCGT 1326 Query 8170 GACAATCAACTTCGGTTTAGGTACTTCGTGGGAAGAGAAACTGATTCAGAAAAGCATTCT 8229 || || |||||| | || || || ||||| ||||| ||||| ||||| Sbjct 1325 AACTCTCGGTTTCGGTCTGGGAACATCCTGGGAGTCACGTCTGATCCAGAAGTCTATTCT 1266 Query 8230 GCAAAATCGTATTGCTGGTCTAGGCAAGACTAAGAAAACTGCTATCTTCCCGAAACTTGT 8289 | | || | ||||||||||| ||| | | | | |||||| | ||||| || || || Sbjct 1265 GAAGAACAGAATTGCTGGTCTCGGCCGCAATCACAGAACTGCGGTTTTCCCTAAGCTGGT 1206 Query 8290 TTTCACGTTGAAAGACGGTGTTAACTTGAAAGAAGGTGATCCTTGTTACGGAATCAAGAA 8349 || | | || || || | ||| ||||| ||||||||| |||| |||||||| Sbjct 1205 GTTTGCCATCAAGGAGGGACTGAACCGTAAAGAGGGTGATCCTAACTACGATATCAAGAA 1146 Query 8350 GCTTGCTCTTGAGTGTGCAAGTAAACGCATGTACCCAGACATTTTGAACTATGAAAAGCT 8409 ||| |||||||| || || || | ||||| || || ||| ||||||| || || | Sbjct 1145 GCTGGCTCTTGAATGCGCCTCCAAGAGAATGTATCCGGATATTCTGAACTACGATCAGGT 1086 Query 8410 AGTTGAAACAACTGGCGGATTCAAGTCGCCTATGGGATGTCGTTCATTC 8458 || | || || ||||||| | || ||||| || || |||||| Sbjct 1085 TGTGAAGGTTACCGGTTCATTCAAGACTCCGATGGGCTGCCGCTCATTC 1037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783290871815760