Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq2619 84.2 3e-11 seq1618 82.4 9e-11 >seq2619 Length=11042 Score = 84.2 bits (92), Expect = 3e-11 Identities = 173/254 (68%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 40711 GGATCATCGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCATTGCGTCCGTGTC 40770 ||||||||||||| || ||||| | | || | ||||| |||||||| ||| |||| Sbjct 2563 GGATCATCGTTTCAGCCTGGAATGCCGGAGAAATTGATAAGATGGCATTAGCTCCTTGTC 2504 Query 40771 ACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTT 40830 | | | |||||||| ||| | || ||| | ||| |||| ||||||||| Sbjct 2503 ATGCTCTTTTCCAGTTTTATGTAGTTAATAACAAATTATCTTGCCAGTTGTATCAGCGAA 2444 Query 40831 CGGTTGATGTC-TTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGACGCAT 40889 ||||||| ||||| | ||| || |||||||| || || ||||| || || ||| Sbjct 2443 GCTGTGATGTCTTTCTTGGTGTT-CCTTTCAATATTGCTAGTTATGCTCTTCTTACTCAT 2385 Query 40890 ATTATCGCTGATATTTGCGGGTACGAAGTAGGTGATCTGGTTTGGACAGGTGGTGATGTC 40949 || || || | |||| || || |||||| | |||||||| || || ||||| Sbjct 2384 ATGATGGCGCAGCAGTGCGATCTTGATGTTGGTGATTTTGTTTGGACCGGCGGAGATGTT 2325 Query 40950 CA--TATCTACAAA 40961 || ||| | |||| Sbjct 2324 CACTTATATTCAAA 2311 >seq1618 Length=17866 Score = 82.4 bits (90), Expect = 9e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40717 TCGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCATTGCGTCCGTGTCACTGTT 40776 |||| | ||||||||||||| ||| | || | |||||||||| ||| ||||| || Sbjct 9388 TCGTCACAGCATGGAACCCTGCTGAGATAGAAGATATGGCATTGCCTCCCTGTCATTGCC 9329 Query 40777 TCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCGGTTG 40836 |||| |||||| || | | | |||| || || ||| || || ||||||| || Sbjct 9328 TCTTTCAGTTCAATGTGAGCGAAGGTAGTCTTTCCTGTCAGCTATACCAACGTTCGGCTG 9269 Query 40837 ATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGC 40876 || | || || || ||||||||||||| ||| ||||| Sbjct 9268 ATATTTTTTTGGGAGTGCCGTTCAATATAGCCAGTTACGC 9229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577435193378400