Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_007581.1 Length=185683 Score E Sequences producing significant alignments: (Bits) Value seq1675 114 2e-20 seq4586 84.2 3e-11 seq4583 82.4 9e-11 >seq1675 Length=5106 Score = 114 bits (126), Expect = 2e-20 Identities = 131/174 (75%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 103067 TAGTCGTTGAGCCTTTTCCTATTCGGAACTTGGTTGCTGATTGTCCATTATTACAACACT 103126 |||||||||| |||| || |||| ||||| ||||||||| ||||| || | | | Sbjct 2173 TAGTCGTTGAACCTTCCGCTGTTCGCGGCTTGGCTGCTGATTGCCCATTTCTA-AGCGTT 2231 Query 103127 TAGGATTTAACCTTATGCCATCTATACTATTTTTTCTACTTTCGTAACTTTCACACTTAG 103186 |||||||||||| | |||||| ||| || ||||| |||||| || ||||||| || Sbjct 2232 TAGGATTTAACCGTGCGCCATCCATATCTTTCTTTCTGCTTTCGCCACCATCACACTCAG 2291 Query 103187 ACTTATTTCATTCTTATGTTGTAGTTAGTATAGCTTTAGGAGTTTCCAGCAGTT 103240 | ||||||| || ||||||| || ||| |||||||| ||||||||| || Sbjct 2292 GC--ATTTCATCCTCATGTTGTGGTAGATATGGCTTTAGGGTTTTCCAGCAATT 2343 >seq4586 Length=21021 Score = 84.2 bits (92), Expect = 3e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 114624 GATAGGTAAGTCTTTGAGATTTATCTCCAACTTTTCCCCCAGTCCAAACCGTACGTGCGA 114683 ||||||||| ||||||| ||||||||||| ||||||||| ||||||||| |||| | Sbjct 11456 GATAGGTAACTCTTTGAT-TTTATCTCCAAGTTTTCCCCCGTCCCAAACCGTGCGTGACA 11514 Query 114684 CTTTCACCGCATACGGCTTTCCATCA 114709 |||| | || |||||||||||||| Sbjct 11515 GTTTCCCATCACACGGCTTTCCATCA 11540 >seq4583 Length=23831 Score = 82.4 bits (90), Expect = 9e-11 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 114624 GATAGGTAAGTCTTTGAGATTTATCTCCAACTTTTCCCCCAGTCCAAACCGTACGTGCGA 114683 |||||||||| ||||||| || ||| || ||||||||||| |||| |||||||||| | Sbjct 2340 GATAGGTAAGGCTTTGAGGTT-ATCACCGCCTTTTCCCCCACTCCACACCGTACGTGAAA 2282 Query 114684 CTTTCACCGCATACGGCTTTCCATC 114708 |||| | |||||||| ||||||| Sbjct 2281 GTTTCCCTTCATACGGCGTTCCATC 2257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594019736253720