Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3176 98.7 2e-15 >seq3176 Length=15124 Score = 98.7 bits (108), Expect = 2e-15 Identities = 243/363 (67%), Gaps = 8/363 (2%) Strand=Plus/Minus Query 68421 GAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCTCGA 68480 ||||||| |||| || || ||| ||||||||| |||| || || |||||||| || Sbjct 1939 GAGTTGTTTGGACTGGTACAGGAAGTTCCTCAGAGCGAAACAACACCATTTTATCCACGT 1880 Query 68481 AGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCG 68540 || ||||| ||||||||| | || | | ||||| || || |||||||| || Sbjct 1879 TCACCCTACGGCGTTGCAAAGCTCTATGGATTCTGGATTATGAAGAACTACCGTGAATCC 1820 Query 68541 TATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAG--AGGCC 68598 ||| |||||| |||||| |||| ||||| || ||||| | ||| | ||| Sbjct 1819 TATGACATGTTCTGCTGCAACGGCATTTTGTTCAACCATGAGAG--CGAACGGCGAGGGG 1762 Query 68599 ATCAGTTCGTGACTCGTAAAATCACGAAGGTGG--TCGCGAATATTTTCAATGGTGTCGA 68656 | || || ||||||||||||||| || | | || ||| ||| | | || Sbjct 1761 AAACCTTTGTCACTCGTAAAATCACGTTGGCAGCTGCCCGCATA-GCCCAAGGTTATCAG 1703 Query 68657 AAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTA 68716 | | || | |||||||| || | ||||| | | || ||||| ||||| || ||||| Sbjct 1702 GACAAGC-TCTATCTCGGCAACCTCAATGCCCTACGCGACTGGGGCTATGCAAAAGATTA 1644 Query 68717 CGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAAC 68776 ||| || |||||| | || ||||| || | || || || | ||| ||||| || Sbjct 1643 CGTGGAGTGCATGTGGCTTATCCTGCAGCAGCCTGAACCTGACGATTTTGTCATTGCTAC 1584 Query 68777 AGG 68779 || Sbjct 1583 TGG 1581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102807947815650