Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_010576.1 Length=55597 Score E Sequences producing significant alignments: (Bits) Value seq1602 134 5e-27 >seq1602 Length=30070 Score = 134 bits (148), Expect = 5e-27 Identities = 288/424 (68%), Gaps = 20/424 (5%) Strand=Plus/Minus Query 4588 TACAGTAGATGAGTGGCTTTCTGGAAATGTTAAAGAAGATGTTATTGAGGCTCTTGAGCA 4647 ||| || ||||| ||||||||||| || || ||||||||| |||| ||| | ||||| Sbjct 21373 TACTGTCGATGAATGGCTTTCTGGCGATATTCGAGAAGATGTAATTGGAGCTTTAGAGCA 21314 Query 4648 AGGTGCCTCTAAAT------TAGATGATTATATCATCGTAGCTGTATCATCAGAAGGTAC 4701 |||||| ||||| | ||||| ||| | || |||| || |||||||| Sbjct 21313 AGGTGCGGCTAAAGGTGGAATGGATGACTATTTAATAATAGCCACTAGTTCTGAAGGTAC 21254 Query 4702 AATTCG---TGACTCTGTTGGTGATACAATTAAAATGGAT--TTACTCAATATATTAAGA 4756 | | || || | ||| | |||| || |||||| || ||| | |||| | | | Sbjct 21253 AGTACGAAATGGCCCTG---GAGATAGTATCAAAATG-ATGCTTA-TGGATATTCTTAAA 21199 Query 4757 GGTGATAAAATAGACCCTCATACATCA--ATCTGGTATTATCGTTTAGATGATGTTCGTG 4814 ||||| | || | || || | ||| || |||| ||| ||||| | | || Sbjct 21198 GGTGAATATATCAATCCGCA--CGTCAGTATTTGGTGGTATAAGCTAGATAAATTAGATG 21141 Query 4815 AAGTAGGAGACCCTGATATGTGGATTAAAGCTAATCCTAATATTGGTGCTACTGTTTCAT 4874 |||| | | || ||||||||| ||||||| ||||| ||||| ||| ||||| |||| Sbjct 21140 AAGTGGCGCAACCAGATATGTGGCTTAAAGCCAATCCAAATATCGGTAAGACTGTATCAT 21081 Query 4875 ATAGTACTTACCAAAAAGCTGTAGCCACTGCCGAAACAGATGGTTCTAAAAGAAATGATA 4934 | || |||||| | ||||| | || |||| || | |||| ||||||||| Sbjct 21080 ACGAGACATACCAATTGGATGTAGAAAGAGCAGAAAAAGCACCTGCTAATCGAAATGATA 21021 Query 4935 TTCTTGCTAAAAGGTTTGGTATTCCAGTTGAAGGTTTTACATACTTCTTTACATATGAAG 4994 | | |||||| | |||||||| || | ||||||| ||| |||| || || ||||||| Sbjct 21020 TCTTAGCTAAACGCTTTGGTATACCTATGGAAGGTTATACCTACTATTTCACGTATGAAG 20961 Query 4995 AAAC 4998 |||| Sbjct 20960 AAAC 20957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177778034777042