Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_013644.1 Length=37856 Score E Sequences producing significant alignments: (Bits) Value seq4575 82.4 2e-11 seq2153 80.6 6e-11 seq1820 80.6 6e-11 >seq4575 Length=28649 Score = 82.4 bits (90), Expect = 2e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 37497 AGGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGA 37556 |||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||| | Sbjct 5962 AGGACCTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCTAGGTTCAA 5903 Query 37557 GCCCT 37561 | ||| Sbjct 5902 GTCCT 5898 >seq2153 Length=8481 Score = 80.6 bits (88), Expect = 6e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 37498 GGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGA 37556 || ||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| Sbjct 59 GGGCCATTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCGGGGTTCGA 1 >seq1820 Length=6076 Score = 80.6 bits (88), Expect = 6e-11 Identities = 60/68 (88%), Gaps = 2/68 (3%) Strand=Plus/Plus Query 37505 TAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAG-CCCTGT 37563 ||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| Sbjct 1 TAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCAGGGTTCGAGTCCCTG- 59 Query 37564 ATGGTCCA 37571 | |||||| Sbjct 60 AGGGTCCA 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121010272308684