Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq2701 116 4e-21 seq124 84.2 2e-11 >seq2701 Length=6067 Score = 116 bits (128), Expect = 4e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 61988 ATTACATTTCCTTGGTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAG 62047 |||||| | || |||||||| | || | ||| || ||||||||||| || | || Sbjct 5367 ATTACAGCTTCTGAGTGAAAGTTCTTGTTACAACATCCTGCTGCTGTTCTTTGGTTAAAG 5308 Query 62048 AATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGAT 62107 | || || || ||||||||||| |||||||| || ||||| |||||||||||| || | Sbjct 5307 AGTTGAAACGTACAGCATAACCTGAAACACGGATTGTCAGTGTAGGATATTTTTCAGGGT 5248 Query 62108 GTTGAACTGCATCTTCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCAC 62167 ||| | |||||| | |||||| | | ||||| ||||| |||||||| || || | Sbjct 5247 GTTCCATTGCATCGAGCAGTGTTTCTCTGTTGAGAACGTTCACATTCAGATGCTGACCGC 5188 Query 62168 CTTCAAC 62174 |||| || Sbjct 5187 CTTCTAC 5181 >seq124 Length=48292 Score = 84.2 bits (92), Expect = 2e-11 Identities = 80/99 (81%), Gaps = 5/99 (5%) Strand=Plus/Plus Query 69991 TGCTCTACCAACTGAGCTATATTCCC--TGAATTTGGTGGGGA--GTGATGGAGTCGAAC 70046 ||||||| |||||||||||| | | | || |||||| || |||||||| |||||| Sbjct 46879 TGCTCTATCAACTGAGCTATTTCCGCATTGTTCTTGGTGTGGGTGGTGATGGATTCGAAC 46938 Query 70047 CACCCGAGTCGCAATGACAACAGATTTACAGTCTGCACC 70085 |||| ||||| || ||||||||||||||||||||| || Sbjct 46939 CACCGAAGTCGAAA-GACAACAGATTTACAGTCTGCCCC 46976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529566244620000