Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq2964 114 2e-20 >seq2964 Length=2227 Score = 114 bits (126), Expect = 2e-20 Identities = 196/282 (70%), Gaps = 3/282 (1%) Strand=Plus/Plus Query 29671 GCAATTCTAGGAAGATTCAGAGTAATCACACCCAAGTTTTGACGACCATCGTGGATCTCT 29730 || || | ||| ||||||||| | | |||||||| || | ||| || |||||||||| Sbjct 951 GCGATACGAGGCAGATTCAGACTTACCACACCCAGATTGTTACGGCCGTCGTGGATCTGA 1010 Query 29731 TCACCATGTTCATTTTCCCATCGACCCAAGAATGAACGACAACCCATGGGGGATTTATAA 29790 |||| |||| | || | | | | |||||| || || ||||| || | || | Sbjct 1011 ACACC--GTTC-TCCTCATACGGGGCGAGGAATGAGCGGCAGCCCATCGGAGTCTTGAAT 1067 Query 29791 GAACCTGTGACCTTTACCACTTGATCGTAACTCATAATATCCGGATATATACGCTTAGAC 29850 ||||| || ||||| || || |||||||| ||| |||||||||||| || | ||| || Sbjct 1068 GAACCGGTAACCTTCACAACCTGATCGTAGTTCAGAATATCCGGATACATTCTCTTGGAG 1127 Query 29851 GAACACTCAAGAGCAAGTTGTTTTATATCGTAATGAGGATCCCAAGGATTCAGATTAAGA 29910 | || |||||||| || | || |||||||| | |||||| | || | || || Sbjct 1128 GCGCATTCAAGAGCCAGCTTCTTGATATCGTAGTTAGGATCACCCTCTTTACGGTTCAGT 1187 Query 29911 CCGTCTTTAAGAGTGAATACAAGTTTAGGAAATACAGCAGTT 29952 || || || | | || || || ||||| || || |||||| Sbjct 1188 CCCTCCTTGATGGCAAACACCAGCTTAGGGAAAACCGCAGTT 1229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752556830851560