Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq152 111 2e-19 seq4320 102 9e-17 seq2369 98.7 1e-15 >seq152 Length=50040 Score = 111 bits (122), Expect = 2e-19 Identities = 125/166 (75%), Gaps = 15/166 (9%) Strand=Plus/Plus Query 22310 ATGATGGGAGTGTGGCGGAATCGGTAGACGCACCAGACTTAAAATCTGTTGAGAATTAAT 22369 |||||| | ||||||||||||||||||||| |||||||||||||||||| | ||| || Sbjct 8425 ATGATGCGCTTGTGGCGGAATCGGTAGACGCTGCAGACTTAAAATCTGTTG-GGATTTAT 8483 Query 22370 CTCGTGGGGGTTCAAGTCCC------CCCAC-------TCCTATTGCCCTTATAGCTCAG 22416 | |||| | ||||||||| | | ||| | ||||| | |||||||| Sbjct 8484 CCCGTGCGAGTTCAAGTCTCGCCTAGCGCACCATTTTTTTTGTTTGCCGGTTTAGCTCAG 8543 Query 22417 -TGGTAGAGCAACGCTTTTGTAAAGCGTAGGTCGTTGGTTCAAATC 22461 |||||||||||||| || |||| |||| ||||| ||||||||| Sbjct 8544 TTGGTAGAGCAACGCATTCGTAATGCGTGGGTCGGGCGTTCAAATC 8589 >seq4320 Length=16669 Score = 102 bits (112), Expect = 9e-17 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 22483 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGTCTCCTAT 22542 |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 16274 TAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGGGGTCAGGAGTTCGAGTCTCCTTA 16215 Query 22543 TCTCCACTCAA 22553 ||||||| ||| Sbjct 16214 TCTCCACGCAA 16204 >seq2369 Length=11493 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 22476 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGT 22535 |||| |||||||||| ||||||||||||||| | ||| |||||| ||||||||||||| | Sbjct 11332 GGGGTATTAGCTCAGCTGGTAGAGCGCCTGCATGGCATGCAGGAGGTCAGGAGTTCGAAT 11391 Query 22536 CTCCTATTCTCCAC 22549 ||||||| |||||| Sbjct 11392 CTCCTATGCTCCAC 11405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560572268247600