Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq3711 104 3e-17 seq1578 100 4e-16 >seq3711 Length=63627 Score = 104 bits (114), Expect = 3e-17 Identities = 67/72 (93%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 216497 GCCACTTTAGCTCAGTTGGATAGAGCAACGCATTTGTAATGCGTAGGTCGTCGGTTCAAG 216556 ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| || Sbjct 13523 GCCACTTTAGCTCAGTTGG-TAGAGCAACGCATTCGTAATGCGTAGGTCGTTGGTTCGAG 13581 Query 216557 TCCGACAAGTGG 216568 ||||||| |||| Sbjct 13582 TCCGACATGTGG 13593 >seq1578 Length=86006 Score = 100 bits (110), Expect = 4e-16 Identities = 68/75 (91%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 216494 CTTGCCACTTTAGCTCAGTTGGATAGAGCAACGCATTTGTAATGCGTAGGTCGTCGGTTC 216553 |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct 85893 CTTGCCACTTTAGCTCAGTTGG-TAGAGCAACGCATTCGTAATGCGTAGGTCTGCGGTTC 85835 Query 216554 AAGTCCGACAAGTGG 216568 |||||| |||||| Sbjct 85834 GAGTCCGCAAAGTGG 85820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745034110361520