Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq152 91.5 2e-13 seq3711 89.7 6e-13 >seq152 Length=50040 Score = 91.5 bits (100), Expect = 2e-13 Identities = 120/165 (73%), Gaps = 15/165 (9%) Strand=Plus/Plus Query 19379 GATGGGAGTGTGGCGGAATCGGTAGACGCACCAGACTTAAAATCTGTTGAGAATTAATCT 19438 |||| | ||||||||||||||||||||| |||||||||||||||||| | ||| ||| Sbjct 8427 GATGCGCTTGTGGCGGAATCGGTAGACGCTGCAGACTTAAAATCTGTTG-GGATTTATCC 8485 Query 19439 CGTGGGGGTTCAAGTCCC------CCCAC-------TCCTATCGCCACTTTAGCTCAGCT 19485 |||| | ||||||||| | | ||| | | ||| |||||||||| | Sbjct 8486 CGTGCGAGTTCAAGTCTCGCCTAGCGCACCATTTTTTTTGTTTGCCGGTTTAGCTCAGTT 8545 Query 19486 GGATAGAGCAACGGTTTTGTAAACCGTAGGTCGTCGGTTCAAGTC 19530 || |||||||||| || |||| ||| ||||| |||||| || Sbjct 8546 GG-TAGAGCAACGCATTCGTAATGCGTGGGTCGGGCGTTCAAATC 8589 >seq3711 Length=63627 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 19469 GCCACTTTAGCTCAGCTGGATAGAGCAACGGTTTTGTAAACCGTAGGTCGTCGGTTCAAG 19528 ||||||||||||||| ||| |||||||||| || |||| |||||||||| ||||| || Sbjct 13523 GCCACTTTAGCTCAGTTGG-TAGAGCAACGCATTCGTAATGCGTAGGTCGTTGGTTCGAG 13581 Query 19529 TCCGACATGTGGCT 19542 |||||||||||||| Sbjct 13582 TCCGACATGTGGCT 13595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563624873669760