Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4405 86.0 1e-11 >seq4405 Length=27319 Score = 86.0 bits (94), Expect = 1e-11 Identities = 171/250 (68%), Gaps = 10/250 (4%) Strand=Plus/Minus Query 81154 CCAAGAAGTGGACTAGCATACAAAAACGGCGTGACTGTTTTGAACGCTCCCGGAACCATC 81213 ||| | || ||||| || ||| || || ||||| || |||| ||||||| |||||| Sbjct 25504 CCACGGAGCGGACTGGCTATCAAGAAAGGGGTGACGGTGCTGAATTCTCCCGGCACCATC 25445 Query 81214 GACAGCGATTTCCGTGGCGAAATAAAGGCTTTGAT---CATCAACCTGTCCCAGGAAGAC 81270 ||| |||| ||||||||| | | | |||| ||||||||||||| | | Sbjct 25444 GACGCTGATTACCGTGGCGAGGT---GTGTGTGATTCTCATCAACCTGTCCGACCAGCCG 25388 Query 81271 TTTGTCATAAACGACGGCGACAGAATCGCCCAAATGGTTATCGCACCAGTCACAA--AGA 81328 |||||||| |||||||| || | | || || ||||| | |||| | || | || Sbjct 25387 TTTGTCATCAACGACGGGGAACGGGTGGCACAGATGGTGGTGGCAC--GCCATGAGCAGG 25330 Query 81329 TTCAATGGGAACAAGTTTTGGATCTCGACGAGACAAAAAGAGGAGAAGGAGGATTTGGAA 81388 | || ||| ||| || || || || |||||| || | |||| |||||||| ||| Sbjct 25329 TGCAGTGGAAACCGGTGGAGGCGCTTGATGAGACAGAACGCGGAGCCGGAGGATTCGGAC 25270 Query 81389 GTACAGGGGT 81398 |||||| || Sbjct 25269 ATACAGGAGT 25260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109409116526933