Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq143 91.5 2e-13 seq1835 89.7 6e-13 >seq143 Length=132465 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 149445 TATTGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTC 149504 ||| ||||| |||||||||||||||||||||||| ||||||| |||||| ||| ||||| Sbjct 76216 TATCGCGGGGTAGAGCAGTCTGGTAGCTCATCAGGCTCATAACCTGAAGGTCGTCGGTTC 76157 Query 149505 AAATCCACCTCCCGC 149519 |||||| | ||||| Sbjct 76156 AAATCCTTCCCCCGC 76142 >seq1835 Length=5127 Score = 89.7 bits (98), Expect = 6e-13 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 149437 CTATTCTA-TATTGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGAT 149495 ||||| || ||| ||||||| ||||||||||| ||||| | | ||||||| | | || | Sbjct 5051 CTATTTTAATATCGCGGGATGGAGCAGTCTGGAAGCTCGCCGGGCTCATAACCCGGAGGT 4992 Query 149496 CGGTGGTTCAAATCCACCTCCCGC 149519 |||||||||||||||||||||||| Sbjct 4991 CGGTGGTTCAAATCCACCTCCCGC 4968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571237188448920