Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= NC_016655.1
Length=51342
Score E
Sequences producing significant alignments: (Bits) Value
seq758 98.7 3e-16
seq4688 96.9 1e-15
seq4293 93.3 1e-14
seq2324 87.8 6e-13
seq2451 86.0 2e-12
>seq758
Length=33601
Score = 98.7 bits (108), Expect = 3e-16
Identities = 75/89 (84%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879
|||| || || |||||||||||||||||||||||| ||||| ||||| || || ||||
Sbjct 8684 ACGGGAAACTCTCCTGCCAGCTCTACCAGCGCAGCGCAGACGTGTTCCTGGGTGTTCCGT 8625
Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACC 24908
||||||||||| ||||||||| || |||
Sbjct 8624 TCAATATCGCGTCCTACGCGCTTCTCACC 8596
>seq4688
Length=13253
Score = 96.9 bits (106), Expect = 1e-15
Identities = 127/175 (73%), Gaps = 6/175 (3%)
Strand=Plus/Plus
Query 24828 CTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATC 24887
||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||| |||
Sbjct 3819 CTGAGCTGCCAGCTCTACCAGCGCAGCGCCGACGTCTTCCTCGGAGTGCCCTTCAACATC 3878
Query 24888 GCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTC---GGACTGAAGGTCGGC 24944
|| ||| || || || ||| | |||| ||| || || ||| || ||||
Sbjct 3879 GCCTCCTATGCCCTCCTCACCATGATGATCGC---ACAGGTCACGGGCCTGCAGCCCGGC 3935
Query 24945 GAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGG 24999
|| ||| || || ||||||| |||| | || |||||| |||| ||||
Sbjct 3936 GAGTTCGTCCACTCCTTCGGCGACACCCACATCTACCTCAACCACTTCGACCAGG 3990
>seq4293
Length=67978
Score = 93.3 bits (102), Expect = 1e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 24828 CTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATC 24887
|| |||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||
Sbjct 67373 CTCAGCTGCCAGCTCTACCAGCGCAGCGCGGACACCTTCCTGGGCGTGCCCTTCAACATC 67314
Query 24888 GCGAGCTACGCGCTGCTGACC 24908
|| |||| ||||||| |||
Sbjct 67313 GCCTCCTACTCGCTGCTCACC 67293
>seq2324
Length=83463
Score = 87.8 bits (96), Expect = 6e-13
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 24834 TGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGAGC 24893
||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct 68327 TGCCAGCTCTACCAGCGCAGCGCCGACACTTTCCTCGGCGTGCCGTTCAACATCGCGTCG 68268
Query 24894 TACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGTCGGCGAATTCATC 24953
|| ||||| | ||| | | ||| | | ||| || | ||||||||||||
Sbjct 68267 TATTCGCTGTTAACCATGATGATAGCGCAGGAATGCGGGCTCCGGCCGGGCGAATTCATC 68208
Query 24954 TGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGCGACCGAACAACTG 25013
||| |||||| |||| | || |||||| | ||||||| | ||||| ||
Sbjct 68207 CACACCACAGGCGACACCCACATCTACCTCAACCACATGGAGCAGGTGGAGGAACAGCTC 68148
Query 25014 TCGCGC 25019
|| |||
Sbjct 68147 TCTCGC 68142
>seq2451
Length=31860
Score = 86.0 bits (94), Expect = 2e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 24821 CGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTT 24880
|||||| ||| ||||||||| || ||||||||||| ||||| ||||| ||||| || ||
Sbjct 18439 CGGAAAACTGTCCTGCCAGCTGTATCAGCGCAGCGCCGACGTGTTCCTGGGCGTTCCCTT 18380
Query 24881 CAATATCGCGAGCTACGCGCTGCTGAC 24907
||| || || |||||||||||| ||
Sbjct 18379 CAACATAGCCTCCTACGCGCTGCTTAC 18353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164162859234352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |