Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq758 98.7 3e-16 seq4688 96.9 1e-15 seq4293 93.3 1e-14 seq2324 87.8 6e-13 seq2451 86.0 2e-12 >seq758 Length=33601 Score = 98.7 bits (108), Expect = 3e-16 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| || || |||||||||||||||||||||||| ||||| ||||| || || |||| Sbjct 8684 ACGGGAAACTCTCCTGCCAGCTCTACCAGCGCAGCGCAGACGTGTTCCTGGGTGTTCCGT 8625 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACC 24908 ||||||||||| ||||||||| || ||| Sbjct 8624 TCAATATCGCGTCCTACGCGCTTCTCACC 8596 >seq4688 Length=13253 Score = 96.9 bits (106), Expect = 1e-15 Identities = 127/175 (73%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 24828 CTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATC 24887 ||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 3819 CTGAGCTGCCAGCTCTACCAGCGCAGCGCCGACGTCTTCCTCGGAGTGCCCTTCAACATC 3878 Query 24888 GCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTC---GGACTGAAGGTCGGC 24944 || ||| || || || ||| | |||| ||| || || ||| || |||| Sbjct 3879 GCCTCCTATGCCCTCCTCACCATGATGATCGC---ACAGGTCACGGGCCTGCAGCCCGGC 3935 Query 24945 GAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGG 24999 || ||| || || ||||||| |||| | || |||||| |||| |||| Sbjct 3936 GAGTTCGTCCACTCCTTCGGCGACACCCACATCTACCTCAACCACTTCGACCAGG 3990 >seq4293 Length=67978 Score = 93.3 bits (102), Expect = 1e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 24828 CTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATC 24887 || |||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct 67373 CTCAGCTGCCAGCTCTACCAGCGCAGCGCGGACACCTTCCTGGGCGTGCCCTTCAACATC 67314 Query 24888 GCGAGCTACGCGCTGCTGACC 24908 || |||| ||||||| ||| Sbjct 67313 GCCTCCTACTCGCTGCTCACC 67293 >seq2324 Length=83463 Score = 87.8 bits (96), Expect = 6e-13 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 24834 TGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGAGC 24893 ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| Sbjct 68327 TGCCAGCTCTACCAGCGCAGCGCCGACACTTTCCTCGGCGTGCCGTTCAACATCGCGTCG 68268 Query 24894 TACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGTCGGCGAATTCATC 24953 || ||||| | ||| | | ||| | | ||| || | |||||||||||| Sbjct 68267 TATTCGCTGTTAACCATGATGATAGCGCAGGAATGCGGGCTCCGGCCGGGCGAATTCATC 68208 Query 24954 TGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGCGACCGAACAACTG 25013 ||| |||||| |||| | || |||||| | ||||||| | ||||| || Sbjct 68207 CACACCACAGGCGACACCCACATCTACCTCAACCACATGGAGCAGGTGGAGGAACAGCTC 68148 Query 25014 TCGCGC 25019 || ||| Sbjct 68147 TCTCGC 68142 >seq2451 Length=31860 Score = 86.0 bits (94), Expect = 2e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 24821 CGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTT 24880 |||||| ||| ||||||||| || ||||||||||| ||||| ||||| ||||| || || Sbjct 18439 CGGAAAACTGTCCTGCCAGCTGTATCAGCGCAGCGCCGACGTGTTCCTGGGCGTTCCCTT 18380 Query 24881 CAATATCGCGAGCTACGCGCTGCTGAC 24907 ||| || || |||||||||||| || Sbjct 18379 CAACATAGCCTCCTACGCGCTGCTTAC 18353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164162859234352