Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq166 86.0 6e-12 seq3314 84.2 2e-11 >seq166 Length=84996 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/111 (79%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 146803 CGGTGTATAGCGCAGCCTGGT-AGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGA 146861 ||| || |||||||||| ||| |||||||||| ||||||| ||||||||| | ||||||| Sbjct 53622 CGGGGTGTAGCGCAGCCCGGTTAGCGCATCTGCTTTGGGAGCAGAGGGTCCCGGGTTCGA 53563 Query 146862 GTCCAGCTACACCGACCAAATTATTGC-GAGGTAGTTCAG-CGGTAGAACA 146910 ||| | ||| ||||| ||| || || || ||| |||| |||||| || Sbjct 53562 ATCCCGGTACCCCGACATAATAATCGCGGAAATAGCTCAGTTGGTAGAGCA 53512 >seq3314 Length=12619 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 146802 ACGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGA 146861 |||| || |||||||||| ||||||||| ||||||||||||||| | ||||| ||||||| Sbjct 12497 ACGGGGTGTAGCGCAGCCCGGTAGCGCACCTGGTTTGGGACCAGGGTGTCGCAGGTTCGA 12556 Query 146862 GTCCAGCTACACCGAC 146877 ||| | || ||||| Sbjct 12557 ATCCTGTCACCCCGAC 12572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477515162437320