Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_018837.1 Length=122024 Score E Sequences producing significant alignments: (Bits) Value seq2964 100 2e-16 >seq2964 Length=2227 Score = 100 bits (110), Expect = 2e-16 Identities = 229/338 (68%), Gaps = 5/338 (1%) Strand=Plus/Minus Query 54023 AAAGAAGTG-TACGATGCCTGTCAAGCACTGGAGTATGAGTGCAATTCTCTTTATAACTC 54081 |||| |||| || || |||| || | || || ||||| || | || ||| ||| Sbjct 1406 AAAGGAGTGCTATGACGCCTTCCAGTCTCTTGAATATGAAGTAAACACCCTGCATACCTC 1347 Query 54082 CAATGGTCAGACCCCATTTATTACATTCGGATTTGGTCTGGGAGAATCTTGGGAGTCTAG 54141 ||| |||||||| || || | || |||| || ||||||||| ||| |||||||| | Sbjct 1346 CAACGGTCAGACTCCGTTCGTAACTCTCGGTTTCGGTCTGGGAACATCCTGGGAGTCACG 1287 Query 54142 ACTAATCCAAAGATCTATTCTAGAAGTCC-GTATGAAAGGTCTAGGA-GCAGACAAACGT 54199 || ||||| | |||||||| |||| | | || ||||| || ||| || | | Sbjct 1286 TCTGATCCAGAAGTCTATTCT-GAAGAACAGAATTGCTGGTCTCGGCCGCAATCACA-GA 1229 Query 54200 ACAGCTATTTTTCCTAAGCTGGTGTTTGCATTGAAACCTGGTCTCAATATGCAAGCAGGA 54259 || || |||| ||||||||||||||||| | || || || || ||| || Sbjct 1228 ACTGCGGTTTTCCCTAAGCTGGTGTTTGCCATCAAGGAGGGACTGAACCGTAAAGAGGGT 1169 Query 54260 GATCCTAACTACGACATTAAACAGTTAGCTATTAAATGTACTTCTGAGCGTATTTACCCT 54319 |||||||||||||| || || || | ||| || |||| | || || | || || || Sbjct 1168 GATCCTAACTACGATATCAAGAAGCTGGCTCTTGAATGCGCCTCCAAGAGAATGTATCCG 1109 Query 54320 GACTACGTGAGTTATGATAAGGTTGTGGAAGTTACGGG 54357 || ||| || ||| |||||||| | ||||| || Sbjct 1108 GATATTCTGAACTACGATCAGGTTGTGAAGGTTACCGG 1071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390327741940915