Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_018860.1 Length=156176 Score E Sequences producing significant alignments: (Bits) Value seq3911 95.1 1e-14 seq1835 95.1 1e-14 seq153 87.8 2e-12 seq2250 82.4 8e-11 >seq3911 Length=21186 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 735 AATATGGTGGACGGAGTAGGGATCGAACCTACGACACGAGGATTTTCAGCCCTCTGCTCT 794 || || ||| | |||| || |||||||| ||||||||||||||||||| |||||||||| Sbjct 21107 AAAATAGTGCCCAGAGTCGGAATCGAACCAACGACACGAGGATTTTCAGTCCTCTGCTCT 21166 Query 795 ACCAACTGAGCTATC 809 ||||||||||||||| Sbjct 21167 ACCAACTGAGCTATC 21181 >seq1835 Length=5127 Score = 95.1 bits (104), Expect = 1e-14 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 748 GAGTAGGGATCGAACCTACGACACGAGGATTTTCAGCCCTCTGCTCTACCAACTGAGCTA 807 |||| || |||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct 4894 GAGTCGGAATCGAACCAACGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAGCTA 4953 Query 808 TC 809 || Sbjct 4954 TC 4955 >seq153 Length=48176 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 739 TGGTGGACGGAGTAGGGATCGAACCTACGACACGAGGATTTTCAGCCCTCTGCTCTACCA 798 |||||| | | | ||||| ||||| |||||||||||||||||| |||||||||||||| Sbjct 16401 TGGTGGTCAGGGACGGGATTGAACCGCCGACACGAGGATTTTCAGTCCTCTGCTCTACCA 16342 Query 799 ACTGAGCTATCCGTCCAT 816 ||||||||| | | |||| Sbjct 16341 ACTGAGCTACCTGACCAT 16324 >seq2250 Length=3703 Score = 82.4 bits (90), Expect = 8e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 753 GGGATCGAACCTACGACACGAGGATTTTCAGCCCTCTGCTCTACCAACTGAGCTA 807 || |||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct 3579 GGAATCGAACCATCGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAGCTA 3633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499603354501440