Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq2964 161 1e-34 >seq2964 Length=2227 Score = 161 bits (178), Expect = 1e-34 Identities = 578/880 (66%), Gaps = 34/880 (4%) Strand=Plus/Minus Query 153200 GCCCGTGCATACATCGAATATCGCCACGATCGCGATATTGCCCGTGAACAGAAAAGTAAG 153259 |||||||| || ||||| || ||||| || | || | |||||| ||||| | Sbjct 1966 GCCCGTGCCTATATCGAGTACCGCCATGAAAGAGACCGTCTGCGTGAAAAGAAAGGCGCT 1907 Query 153260 CTGTTCAAAGATATCTCCGGTATGGTGAATCTGTCCAACAAAGAGATCACCAACGAGAAC 153319 ||| | | || ||| || || | ||| ||| || ||| | |||||||| Sbjct 1906 CTGAGCCAGGAGATCAAGGGACTGATCGATCAGTCAAATGCAGATCTGCTTAACGAGAAT 1847 Query 153320 GCGAACAAAGAC-GCAAGGGTATTCCCTACACAGCGCGATCTGCTGGCTGGTATCGTAGC 153378 || ||||| ||| |||||| |||||| || ||||| || || || || ||||| || || Sbjct 1846 GCCAACAAGGACAGCAAGGTTATTCCG-ACCCAGCGTGACCTTCTTGCAGGTATTGTTGC 1788 Query 153379 GAAACACTTCGCACGTAACCACATTCTGCCAAAACACATTGTAGAAGCGCATGATTCTGG 153438 |||| ||| | ||||| || || | | |||| ||| ||||| || Sbjct 1787 ACGCCACTATGCAAAACAGCACATGCTTCCTCAGGAAGTTGTGAGAGCCCATGAAAGAGG 1728 Query 153439 TGATATCCATTATCATGATCTGGATTACAGCCCGTTCACGCC-ATACACAAACTGCTGTC 153497 || ||||||| ||| ||||| || || |||||| || || ||| ||| | Sbjct 1727 GGAGATCCATTTTCACGATCTCGACTATTCACCGTTCTTCCCGATGTTCAA-CTGTATGC 1669 Query 153498 TGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAAC 153557 || | ||| | || ||||||| || |||||||||||||| || || |||||| Sbjct 1668 TGATCGATGTCGGCGGAATGCTGGAACGCGGTTTCAAGATGGGTAATGCCGAAATCGAAT 1609 Query 153558 CCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTGCCT 153617 | || || |||||| || || || || ||| |||||||||| ||| ||| ||||| Sbjct 1608 CACCTAAGTCAATCAGTACCGCAACCGCGGTTACCGCACAGATCATCGCCCAGGTTGCCA 1549 Query 153618 CTCACCAGTACGGCGGGACAACCTTTGCTAACG--TTGATAAAGTGCTGGCTCCATATGT 153675 || |||||||| |||||| | | | || |||| | ||||| || || ||||| Sbjct 1548 GCCATATCTACGGCGGTACAACCAT--CAACCGCTGTGATGAGGTGCTTGCCCCGTATGT 1491 Query 153676 TCAAATGACATATGAT-AAGCACTTTAAAGAT-GCCAAAAAGTATCAAATCCCTCGTGAT 153733 | | || | | || ||| | | ||||| ||| | ||| || || || |||| Sbjct 1490 TACCAAGA-GTTTCATGAAGTA-TCAGAAGATGGCCGAGGAGTGGCACAT---TCCTGAT 1436 Query 153734 --GTTCAG-TATGCAATAGATAAAACTGAAAAGGA-TGTTTTCGACGCGTTTCAGTCATA 153789 | ||| | ||| || ||||||||||| || | | ||||| || ||||| Sbjct 1435 CCGGACAGCTTTGCCCGAGCCCGTACTGAAAAGGAGTGCTAT-GACGCCTTCCAGTCTCT 1377 Query 153790 TGAATACGAAGTAAACACCCTGCATACTGCGAACGGTCAAACCCCGTTTGTTACAATTAC 153849 |||||| |||||||||||||||||||| | |||||||| || ||||| || || | Sbjct 1376 TGAATATGAAGTAAACACCCTGCATACCTCCAACGGTCAGACTCCGTTCGTAACTCTCGG 1317 Query 153850 GTTCGGTACTGGTCA-ATCCCGATGTGA---ACGCATGATCCAGAAAGCGATTCTGAAAA 153905 |||||| |||| | |||| || || ||| |||||||||| | |||||||| | Sbjct 1316 TTTCGGT-CTGGGAACATCC---TGGGAGTCACGTCTGATCCAGAAGTCTATTCTGAAGA 1261 Query 153906 ACCGTATTCGCGGCCTGGGTAAAGAGGGTATCACTCCGGTATTCCCGAAACTGGTTATGT 153965 || | ||| || || || | | ||| |||| ||||| || ||||| | Sbjct 1260 ACAGAATTGCTGGTCTCGGCCGCAATCACAGAACTGCGGTTTTCCCTAAGCTGGTGTTTG 1201 Query 153966 TCATGGAAAAAGGAATCAACCTTGATCCAGAG---GATCGCAACTATGACATCAAACAAC 154022 ||| | | ||| | |||| | | |||| |||| ||||| || ||||| | | Sbjct 1200 CCATCAAGGAGGGACTGAACCGTAA---AGAGGGTGATCCTAACTACGATATCAAGAAGC 1144 Query 154023 TTGCCCTGGAATGTGCTTCTAAACGCATGTACCCAGATAT 154062 | || || ||||| || || || | ||||| || ||||| Sbjct 1143 TGGCTCTTGAATGCGCCTCCAAGAGAATGTATCCGGATAT 1104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570053263914120