Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_019402.1 Length=76631 Score E Sequences producing significant alignments: (Bits) Value seq2964 107 9e-19 >seq2964 Length=2227 Score = 107 bits (118), Expect = 9e-19 Identities = 666/1051 (63%), Gaps = 57/1051 (5%) Strand=Plus/Plus Query 45709 CGACCGTGTTTGAAGATATTGATGATATCATCGTCGGGTTTGAGACGAACTCCAAACGCT 45768 || |||| ||||| || ||| ||||| ||||| | || || || || || | || Sbjct 750 CGCCCGTTCTTGAAAATCTTGGATATATCCTCGTCAGCCTTAAGGCGGACACCGCAGGCA 809 Query 45769 CCCTCGGTGTAGAGAATTGGGGCGACAGCAGCTTTAACACCACGTAGGCGTTCAATGCGG 45828 ||||| ||||||| || ||||| ||| || || ||||| || || |||| ||| Sbjct 810 CCCTCCATGTAGAGGATCGGGGCCACACGTGCCTTCACACCGTCCAGACGGGCAATACGG 869 Query 45829 GTATCAAGTGCTCGTTTAGCA-AGGTCAAGGCGTTCGTCAAGGATAGTGTAAAACTTC-T 45886 || || | | | ||| | || || ||||| | ||||| |||| || || | Sbjct 870 CACAGCAGCGC-CTTCTTGCAGATGTTCAGACGTTCACCGAGGATCTTGTAGAATTTGGT 928 Query 45887 CCCAATCTCCGCCT--GATTCGATGGCAATACGAGGAAGGTTGAGACTAACAACGCCGAG 45944 | || ||| ||| | || ||||| |||||||| || || ||||| || || || || Sbjct 929 CTCA---TCCCCCTTGGCCTCAATGGCGATACGAGGCAGATTCAGACTTACCACACCCAG 985 Query 45945 GTTGTTGCGTCCGTCGAGCACCTCATTTCCATCTCCGTCCTTCCACACACTG----AGGA 46000 ||||| || |||||| | | || | | |||| || || || || | |||| Sbjct 986 ATTGTTACGGCCGTCGTGGATCTGAA------CACCGTTCT-CCTCATACGGGGCGAGGA 1038 Query 46001 AAGAACGGCATCCCATAGGACTAACAGGTACACTTGAGCCAGTGATACCTCGGTTAGCTT 46060 | || ||||| ||||| ||| | | | | ||| || || | ||| | || Sbjct 1039 ATGAGCGGCAGCCCATCGGAGT--CTTGAA----TGAACCGGTAA--CCTTCACAACCTG 1090 Query 46061 -TCGC-GCTGATGATATCTGGATACAGACGCTTGGAGGAGCATTCAAGTGCAAGCTGCTT 46118 ||| | | | ||||| ||||||| | |||||||| ||||||||| || |||| ||| Sbjct 1091 ATCGTAGTTCAGAATATCCGGATACATTCTCTTGGAGGCGCATTCAAGAGCCAGCTTCTT 1150 Query 46119 AATATCATAATTCGGGTCTTCCGGGTTTAAGTTAACACCCTCGTCCATGAACATTACGAG 46178 ||||| || || || || || || ||| | ||||| | ||| | || || Sbjct 1151 GATATCGTAGTTAGGATCACCCTCTTTACGGTTCAGTCCCTCCTTGATGGCAAACACCAG 1210 Query 46179 TTTCGGGAAAACCGCAGT---GAGACCTTCCGCGCCGAGACCCTTAATACGAACCTTGAG 46235 || |||||||||||||| | || || || ||||||||| ||| | ||| || Sbjct 1211 CTTAGGGAAAACCGCAGTTCTGTGA--TTGCG-GCCGAGACCAGCAATTCTGTTCTTCAG 1267 Query 46236 GATTGCTCGCTGGATTTCTCGTTCAAACCAGCTAGTTCCCATACCGAATGTAACAGTAAC 46295 || | |||||| ||| |||| ||||||| |||||| | ||| || Sbjct 1268 AATAGACTTCTGGATCAGACGTGACTCCCAGGATGTTCCCAGACCGAAACCGAGAGTTAC 1327 Query 46296 GAATGGCTGCTGACCATTGGTTGTGAAGAGCGTGTTAATTTCATATTCATATGCTTGAAT 46355 ||| || |||||| |||| || || ||||| | |||||||||| | || | Sbjct 1328 GAACGGAGTCTGACCGTTGGAGGTATGCAGGGTGTTTACTTCATATTCAAGAGACTGGAA 1387 Query 46356 CCCATCGTAAATTTCTTTAACAGTGAGTTCTCTGGCATAGGCTTCCGTATCATCGACTCC 46415 | || || || || |||| | ||| |||| || |||| |||| | Sbjct 1388 GGCGTCATAGCACTCCTTTTCAGTACGGGCTCGGGCAAAGCTGTCCGGATCAGGAATGTG 1447 Query 46416 CCAATCATAA-CCACGTTGCATGTGCTT-ATTAAA-----GGTAATCTCTGCATAGGGTG 46468 ||| || | ||| || | | ||| || ||| ||||| |||| || | Sbjct 1448 CCACTCCTCGGCCATCTT-CTGATACTTCATGAAACTCTTGGTAA------CATACGGGG 1500 Query 46469 CGAGTACTTGGTCAATATTAGCG----AACGTTGTCCCACCGTACTGGTGAGAAGCAACT 46524 | || || | ||| |||| | ||||| || ||||| || ||||| Sbjct 1501 CAAGCACCTCATCAC----AGCGGTTGATGGTTGTACCGCCGTAGATATGGCTGGCAACC 1556 Query 46525 TGAGCGGTAATCTGAGCCATTACTGCACATGCCACACCAATAGATTTGGGTGATTCGATT 46584 || ||| | ||||| || | || || ||| || || || || |||||||||||| Sbjct 1557 TGGGCGATGATCTGTGCGGTAACCGCGGTTGCGGTACTGATTGACTTAGGTGATTCGATT 1616 Query 46585 TGAGCATTACCTAACTTGAAGCCATTTTCCAACATACCTTTGAGGTCAACCAAACAGCAG 46644 | |||||||| | |||||| || ||||| ||| || || || | || ||| Sbjct 1617 TCGGCATTACCCATCTTGAAACCGCGTTCCAGCATTCCGCCGACATCGATCAGCATACAG 1676 Query 46645 TTGGTCATAGGTAGGAATGGAGAGTAGTCCAAATCGTGGTAATGAATTTCGCCTCTCTCG 46704 ||| ||| || | ||| || || ||||| | |||||| |||| || || ||||| || Sbjct 1677 TTGAACATCGGGAAGAACGGTGAATAGTCGAGATCGTGAAAATGGATCTCCCCTCTTTCA 1736 Query 46705 TGAGCATCAACAATGTCCCGAGGAAGAATGT 46735 || || |||| ||| ||||||| |||| Sbjct 1737 TGGGCTCTCACAACTTCCTGAGGAAGCATGT 1767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245079168838288