Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_019490.1 Length=49329 Score E Sequences producing significant alignments: (Bits) Value seq1942 143 8e-30 >seq1942 Length=56231 Score = 143 bits (158), Expect = 8e-30 Identities = 332/495 (67%), Gaps = 14/495 (3%) Strand=Plus/Minus Query 25196 CAAGAATTGTTCCGACAAGTTCTCTATGTTGTCTAAATAGGTCGTGTGGATATGTAGGAC 25255 || ||||||||| |||| | |||| |||||| | ||| || || |||||||| | || Sbjct 24157 CAGGAATTGTTCAGACAGATACTCTTTGTTGTTGAGATACGTGGTATGGATATGCAATAC 24098 Query 25256 ATCGGGGTGGGTGCTTATCTGCACATCTACACCGTCAATCTGTACTATCTTGTGGGTGTT 25315 | ||| || ||||| ||||| || ||||||||||| | | ||||| |||| |||| Sbjct 24097 GTTGGGATGCGTGCTAATCTGTACCGGTACACCGTCAAAATATTCTATCCTGTGTGTGTC 24038 Query 25316 TTCAATGTATTTTTTATAAATAAAATGGTCGGAGTCGGTAGGGTTGAGTATCAGTATAAC 25375 || |||||||| | ||| || || |||| | |||||| ||||| | ||| | ||| | Sbjct 24037 TTTGATGTATTTCTCATAGATGAAGTGGTTGCTGTCGGTCGGGTTCATTATGATTATGA- 23979 Query 25376 TCTTAACTGTTT----AT-TTTTCTGACGAATGGATAGGATTAACTTTTCGTAATCTTCC 25430 || ||| || || |||||| || || || |||| | || | || | Sbjct 23978 ----TACGATTTCGCAATCCTTGCTGACGTATAGAGAGCATTATGGTATCAAACTCACGC 23923 Query 25431 TCGCTTTCCCACTCTTCCATTTCATCGCCCACGAAGGTGGTTATCCCTTGTATGGATTTA 25490 || | ||| || || |||||| | || ||||| ||||| | || |||||||| Sbjct 23922 TCATTAGTCCATTCCTCAGCCTCATCGACTACAAAGGTTGTTATGTCATGAATGGATTTC 23863 Query 25491 AGGTTTGCCGTTTGGTTTCCTGACGAAGTTTTTATCCCTCTAAATAAAACACTACTTCCT 25550 || ||||| || ||||| || ||| || | ||| || | || | || || || || Sbjct 23862 AGTTTTGCGGTCTGGTTGCCGCTCGATGTCTGTATGCCACGGAACATCACTCTGCTGCCA 23803 Query 25551 GAAAATTTATTTAGTATTTCATTGTTTGTTACTGTAAAATATTCCTGCACG--CCCTCTT 25608 | | | |||| | | ||| | ||| || || ||| || | | ||| || || Sbjct 23802 GTAGAGATATTAACGACATCAGT-CTTGGTAGAGTGAAA-ATACTTTGACGTACCGTCGG 23745 Query 25609 TTTCTATTTTCTCCTCAAACTCTGGAATGATAGAAATACGAGCGGAGGTCATCGTGTAAC 25668 ||||| |||||| |||||| || || | ||||||| || || ||||||||||| Sbjct 23744 CCTCTATCTTCTCCAAAAACTCAGGTATCACGGAAATACCTGCCGAAACCATCGTGTAAC 23685 Query 25669 GGCTAAAGAGTATCT 25683 | | ||||||||| Sbjct 23684 GTGTGTAGAGTATCT 23670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157721649277258