Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq4318 86.0 9e-12 seq764 86.0 9e-12 seq1608 84.2 3e-11 >seq4318 Length=18309 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 199791 GCGCAGTTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGAGTCCTGTATCA 199850 |||||||||||||||| |||||||||||||||||||||| || ||||||||| ||| | Sbjct 5254 GCGCAGTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCATGTTCGAGTCATGTCACC 5195 Query 199851 CCGAC 199855 ||||| Sbjct 5194 CCGAC 5190 >seq764 Length=17931 Score = 86.0 bits (94), Expect = 9e-12 Identities = 69/78 (88%), Gaps = 4/78 (5%) Strand=Plus/Plus Query 199780 TTCGGTGAT-TAGCGCAGTTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCG 199838 ||||| ||| | |||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct 10366 TTCGG-GATGTGGCGCAGTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAAGTTCG 10424 Query 199839 AGTCCTGT-ATCACCGAC 199855 |||| ||| ||| ||||| Sbjct 10425 AGTCTTGTCATC-CCGAC 10441 >seq1608 Length=23922 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 198931 ATTTGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTT 198990 ||| || ||||||||||||| |||||||||||| ||||||||||| | |||| ||||| Sbjct 17033 ATTCGGTCCCTTAGCTCAGTCGGTTAGAGCAGCTGACTCATAATCAGCGGGTCCTTGGTT 16974 Query 198991 CGAGTCCAGTAGGGGCCAC 199009 |||| ||| |||| |||| Sbjct 16973 CGAGCCCAAGAGGGACCAC 16955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741402341856120