Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20]
5,099 sequences; 74,234,735 total letters
Query= NC_019538.1
Length=231743
Score E
Sequences producing significant alignments: (Bits) Value
seq4318 86.0 9e-12
seq764 86.0 9e-12
seq1608 84.2 3e-11
>seq4318
Length=18309
Score = 86.0 bits (94), Expect = 9e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 199791 GCGCAGTTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCGAGTCCTGTATCA 199850
|||||||||||||||| |||||||||||||||||||||| || ||||||||| ||| |
Sbjct 5254 GCGCAGTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCATGTTCGAGTCATGTCACC 5195
Query 199851 CCGAC 199855
|||||
Sbjct 5194 CCGAC 5190
>seq764
Length=17931
Score = 86.0 bits (94), Expect = 9e-12
Identities = 69/78 (88%), Gaps = 4/78 (5%)
Strand=Plus/Plus
Query 199780 TTCGGTGAT-TAGCGCAGTTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTCG 199838
||||| ||| | |||||||||||||||| |||||||||||||||||||||| || |||||
Sbjct 10366 TTCGG-GATGTGGCGCAGTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAAGTTCG 10424
Query 199839 AGTCCTGT-ATCACCGAC 199855
|||| ||| ||| |||||
Sbjct 10425 AGTCTTGTCATC-CCGAC 10441
>seq1608
Length=23922
Score = 84.2 bits (92), Expect = 3e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 198931 ATTTGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTT 198990
||| || ||||||||||||| |||||||||||| ||||||||||| | |||| |||||
Sbjct 17033 ATTCGGTCCCTTAGCTCAGTCGGTTAGAGCAGCTGACTCATAATCAGCGGGTCCTTGGTT 16974
Query 198991 CGAGTCCAGTAGGGGCCAC 199009
|||| ||| |||| ||||
Sbjct 16973 CGAGCCCAAGAGGGACCAC 16955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741402341856120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |