Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_020482.1 Length=39921 Score E Sequences producing significant alignments: (Bits) Value seq3842 95.1 3e-15 seq531 84.2 6e-12 seq4232 82.4 2e-11 >seq3842 Length=8765 Score = 95.1 bits (104), Expect = 3e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 5598 GTGGTGGAATTGGTAGACACGCCAGTCTTAGGAACTGGTGTCGCAAGACGTGTAGGTTCA 5657 ||||||||||||||||||||||||| ||||||| |||||| ||| || ||||||||||| Sbjct 4728 GTGGTGGAATTGGTAGACACGCCAGACTTAGGATCTGGTGCCGCGAGGCGTGTAGGTTCG 4669 Query 5658 AATCCTATCTCGCCTAC 5674 | ||||||| || ||| Sbjct 4668 AGTCCTATCAGGCGTAC 4652 >seq531 Length=10761 Score = 84.2 bits (92), Expect = 6e-12 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 5598 GTGGTGGAATTGGTAGACACGCCAGTCTTAGGAACTGGTGTCGCAAGACGTGTAGGTTCA 5657 ||||||||||||||||||||||||| ||||||| |||||| ||| || |||||| |||| Sbjct 3275 GTGGTGGAATTGGTAGACACGCCAGACTTAGGATCTGGTGCCGCGAGGCGTGTAAGTTCG 3334 Query 5658 AATCCTATC 5666 | || |||| Sbjct 3335 AGTCTTATC 3343 >seq4232 Length=228822 Score = 82.4 bits (90), Expect = 2e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 5598 GTGGTGGAATTGGTAGACACGCCAGTCTTAGGAACTGGTGTCGCAAGACGTGTAGGTTCA 5657 ||||||||||||||||||||||||| ||||||| |||||| || || |||||| |||| Sbjct 222174 GTGGTGGAATTGGTAGACACGCCAGACTTAGGATCTGGTGCCGAGAGGCGTGTAAGTTCG 222115 Query 5658 AATCCTATCTCGCCTACCAG 5677 | || |||| || ||| || Sbjct 222114 AGTCTTATCAGGCGTACGAG 222095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127617872190154