Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq4320 105 8e-18 seq2369 91.5 2e-13 seq152 87.8 2e-12 >seq4320 Length=16669 Score = 105 bits (116), Expect = 8e-18 Identities = 63/66 (95%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 16209 TGGAGATAAGGAGACTCGAACTCCTGACCCCCTGCTTGCAAAGCAGGTGCTCTACCAACT 16268 Query 35882 GAGCTA 35887 |||||| Sbjct 16269 GAGCTA 16274 >seq2369 Length=11493 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 ||||| |||||||| |||||||||||||| ||||| ||| | ||||| ||||||||| || Sbjct 11404 TGGAGCATAGGAGATTCGAACTCCTGACCTCCTGCATGCCATGCAGGCGCTCTACCAGCT 11345 Query 35882 GAGCTAATTCCCC 35894 |||||||| |||| Sbjct 11344 GAGCTAATACCCC 11332 >seq152 Length=50040 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 37303 GACTTGAACCCCCACGAGATTAATTCTCAACAGATTTTAAGTCTGGTGCGTCTACCGATT 37362 ||||||||| | |||| ||| ||| | |||||||||||||||||| ||||||||||||| Sbjct 8501 GACTTGAACTCGCACGGGATAAATCC-CAACAGATTTTAAGTCTGCAGCGTCTACCGATT 8443 Query 37363 CCGCCACACTCCCATCAT 37380 |||||||| | |||||| Sbjct 8442 CCGCCACAAGCGCATCAT 8425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572017938682680