Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq2964 158 2e-33 >seq2964 Length=2227 Score = 158 bits (174), Expect = 2e-33 Identities = 470/725 (65%), Gaps = 29/725 (4%) Strand=Plus/Minus Query 172071 AGCACATATAAGTGGCGATATTCATTTTCATGATTTAGATTACAGTCCATTATTTCCGCA 172130 ||| ||| ||| || || || |||||||| ||| | || || || || || ||| Sbjct 1742 AGCCCATGAAAGAGGGGAGATCCATTTTCACGATCTCGACTATTCACCGTTCTTCCCGAT 1683 Query 172131 ATTCAACTGTATGCTTATTGATATCAAAGGCATGCTTGAAAACGGATTTAAAATGGGTAA 172190 |||||||||||||| || ||| || || ||||| ||| ||| || || |||||||| Sbjct 1682 GTTCAACTGTATGCTGATCGATGTCGGCGGAATGCTGGAACGCGGTTTCAAGATGGGTAA 1623 Query 172191 TGCTGAGATCGAAG------AGCCAAACAGTATCGCGACTGCTGCGACTATTGTCACTCA 172244 ||| || |||||| || ||| ||||| ||| || || | || | | || Sbjct 1622 TGCCGAAATCGAATCACCTAAGTCAATCAGTACCGCAACCGCGGTTAC------CGCACA 1569 Query 172245 GATCATACAACAAGTAAGTAGTCACATTTACGGCGGCAACACTGTTAATAGAATTGACGA 172304 |||||| || || || || || |||||||| | || | || | ||| || Sbjct 1568 GATCATCGCCCAGGTTGCCAGCCATATCTACGGCGGTACAACCATCAACCGCTGTGATGA 1509 Query 172305 AGTTCTAGCACCATATGTTCGTAAGTCGTATTACAAATGGCTTGAGGTTGGTCGCGAAGA 172364 || || || || |||||| ||| || | | || || | ||| || | || Sbjct 1508 GGTGCTTGCCCCGTATGTTACCAAGA-GTTTCATGAAGTATCAGAAGATGGCCGAGGAGT 1450 Query 172365 G---CATCCC-GATTCAGACTCAAAAGCAGCTATCTTTGCACGTAAACGTGTCGAGAAAG 172420 | ||| || ||| | ||| | |||||| || ||| || || | Sbjct 1449 GGCACATTCCTGATCCGGAC------------AGCTTTGCCCGAGCCCGTACTGAAAAGG 1402 Query 172421 AAACGTACGACGCTTTTCAAACGTTTGAGTATCAAGTTAACACAATGCAGACTTCGAACG 172480 | || ||||| || || | |||| ||| |||| ||||| |||| || || |||| Sbjct 1401 AGTGCTATGACGCCTTCCAGTCTCTTGAATATGAAGTAAACACCCTGCATACCTCCAACG 1342 Query 172481 GTCAGACGCCATTCACGACGATTAACTTCGGTCTAGGTACATCGTGGGAAGAAAAGCTTA 172540 ||||||| || ||| || | |||||||| || ||||| ||||| | || | Sbjct 1341 GTCAGACTCCGTTCGTAACTCTCGGTTTCGGTCTGGGAACATCCTGGGAGTCACGTCTGA 1282 Query 172541 TTCAGAAATGCATTCTGCAAAATCGAATTGCTGGTCTAGGCAAGACAAAGAAAACAGCGA 172600 | ||||| | |||||| | || ||||||||||||| ||| | | | ||| ||| Sbjct 1281 TCCAGAAGTCTATTCTGAAGAACAGAATTGCTGGTCTCGGCCGCAATCACAGAACTGCGG 1222 Query 172601 TTTTCCCGAAACTTGTATTCACTATCAAAGATGGTGTGAACTTGAAAGAAGGCGATCCGT 172660 ||||||| || || || || | ||||| || || ||||| ||||| || ||||| Sbjct 1221 TTTTCCCTAAGCTGGTGTTTGCCATCAAGGAGGGACTGAACCGTAAAGAGGGTGATCCTA 1162 Query 172661 GTTACGGCATTAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCT 172720 |||| || |||||||| || ||||||||||| ||| | |||||||| ||||| Sbjct 1161 ACTACGATATCAAGAAGCTGGCTCTTGAATGCGCCTCCAAGAGAATGTATCCGGATATTC 1102 Query 172721 TGAGCTATGAAAAGCTAGTAGAAACAACTGGCGGGTTTAAGTCACCGATGGGATGTCGTT 172780 ||| ||| || || | || | || || || ||| | |||||||| || || | Sbjct 1101 TGAACTACGATCAGGTTGTGAAGGTTACCGGTTCATTCAAGACTCCGATGGGCTGCCGCT 1042 Query 172781 CATTC 172785 ||||| Sbjct 1041 CATTC 1037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791856725814840