Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq152 95.1 1e-14 seq3952 84.2 2e-11 seq4374 82.4 8e-11 >seq152 Length=50040 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 9363 ATGATGGGAGCGTGGCGGAATCGGTAGACGCACCAGACTTAAAATCTGTTGGGCAATAGC 9422 |||||| | |||||||||||||||||||| |||||||||||||||||||| || | Sbjct 8425 ATGATGCGCTTGTGGCGGAATCGGTAGACGCTGCAGACTTAAAATCTGTTGGGATTTATC 8484 Query 9423 CCGTGAGAGTTCAAGTCTCTCC 9444 ||||| ||||||||||||| || Sbjct 8485 CCGTGCGAGTTCAAGTCTCGCC 8506 >seq3952 Length=6226 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 148131 CGGGGTGTAGCTTAGCTTGG-TAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAA 148189 |||||||| ||| || |||| |||||| || | ||||||| | || |||||||||||| | Sbjct 1004 CGGGGTGTGGCTCAGTTTGGCTAGAGCACCTGGTTTGGGACCAGGGGGTCGCAGGTTCGA 945 Query 148190 ATCCTGCCACCCCGATTT 148207 |||||| ||||||||||| Sbjct 944 ATCCTGTCACCCCGATTT 927 >seq4374 Length=59948 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 9772 TGGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGA 9830 ||||| |||||||||| ||| |||||| ||||||||||||||||| ||| |||||||| Sbjct 2402 TGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCGACGGTTCGA 2343 Query 9831 GTCCGCTATTCTCCA 9845 |||| |||||||| Sbjct 2342 ATCCGTCATTCTCCA 2328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549587368442280