Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_021788.1 Length=145865 Score E Sequences producing significant alignments: (Bits) Value seq3152 98.7 9e-16 seq3332 95.1 1e-14 seq4090 91.5 1e-13 seq4240 86.0 6e-12 seq124 82.4 7e-11 >seq3152 Length=23011 Score = 98.7 bits (108), Expect = 9e-16 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 90620 CTTTTATATACTTGAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTA 90679 ||||||| ||| || ||||||||||||||||||| ||||||||||||| | |||||| Sbjct 4055 CTTTTATCTACGGGAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTG 4114 Query 90680 GGTTCGAGTCCTACCTCTCGTGCT 90703 |||||||||||| | || |||||| Sbjct 4115 GGTTCGAGTCCTCCTTCCCGTGCT 4138 >seq3332 Length=10063 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 90623 TTATATACTTGAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGGT 90682 |||| ||| || ||||||||||||||||||| ||||||||||||| | |||||| ||| Sbjct 321 TTATTTACGGGAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGT 380 Query 90683 TCGAGTCCTACCTCTCGTGCTA 90704 ||||||||| | || ||||||| Sbjct 381 TCGAGTCCTCCTTCCCGTGCTA 402 >seq4090 Length=21464 Score = 91.5 bits (100), Expect = 1e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 90622 TTTATATACTTGAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGG 90681 || || ||| || ||||||||||||||||||| ||||||||||||| | |||||| || Sbjct 1826 TTAATTTACGGGAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGG 1885 Query 90682 TTCGAGTCCTACCTCTCGTGCTA 90704 |||||||||| | || ||||||| Sbjct 1886 TTCGAGTCCTCCTTCCCGTGCTA 1908 >seq4240 Length=95751 Score = 86.0 bits (94), Expect = 6e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 90633 GAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGGTTCGAGTCCTA 90692 || ||||||||||||||||||| ||||||||||||| | |||||| ||||||||| || Sbjct 7269 GAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGAGTTCGAGTCTTA 7328 Query 90693 CCTCTCGTGCTA 90704 | || ||||||| Sbjct 7329 CTTCCCGTGCTA 7340 >seq124 Length=48292 Score = 82.4 bits (90), Expect = 7e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 90633 GAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGGTTCGAGTCCTA 90692 || ||||||||||||||||||| ||||||||||||| | |||||| ||||||||| || Sbjct 45402 GAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGAGTTCGAGTCTTA 45343 Query 90693 CCTCTCGTGC 90702 | || ||||| Sbjct 45342 CTTCCCGTGC 45333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466610257533000