Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_021798.1 Length=145343 Score E Sequences producing significant alignments: (Bits) Value seq4090 96.9 3e-15 seq3332 95.1 1e-14 seq3152 95.1 1e-14 seq4240 86.0 6e-12 seq124 82.4 7e-11 >seq4090 Length=21464 Score = 96.9 bits (106), Expect = 3e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 90799 GGCTTTATATACTTGAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGT 90858 ||||| || ||| || ||||||||||||||||||| ||||||||||||| | |||||| Sbjct 1823 GGCTTAATTTACGGGAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGT 1882 Query 90859 AGGTTCGAGTCCTACCTCTCGTGCTA 90884 |||||||||||| | || ||||||| Sbjct 1883 GGGTTCGAGTCCTCCTTCCCGTGCTA 1908 >seq3332 Length=10063 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 90803 TTATATACTTGAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGGT 90862 |||| ||| || ||||||||||||||||||| ||||||||||||| | |||||| ||| Sbjct 321 TTATTTACGGGAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGT 380 Query 90863 TCGAGTCCTACCTCTCGTGCTA 90884 ||||||||| | || ||||||| Sbjct 381 TCGAGTCCTCCTTCCCGTGCTA 402 >seq3152 Length=23011 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 90802 TTTATATACTTGAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGG 90861 ||||| ||| || ||||||||||||||||||| ||||||||||||| | |||||| || Sbjct 4057 TTTATCTACGGGAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGG 4116 Query 90862 TTCGAGTCCTACCTCTCGTGCT 90883 |||||||||| | || |||||| Sbjct 4117 TTCGAGTCCTCCTTCCCGTGCT 4138 >seq4240 Length=95751 Score = 86.0 bits (94), Expect = 6e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 90813 GAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGGTTCGAGTCCTA 90872 || ||||||||||||||||||| ||||||||||||| | |||||| ||||||||| || Sbjct 7269 GAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGAGTTCGAGTCTTA 7328 Query 90873 CCTCTCGTGCTA 90884 | || ||||||| Sbjct 7329 CTTCCCGTGCTA 7340 >seq124 Length=48292 Score = 82.4 bits (90), Expect = 7e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 90813 GAGTAGCTCAGTTGGTAGAGCAGTGGTCTCCAAAACCAAAGGTCGTAGGTTCGAGTCCTA 90872 || ||||||||||||||||||| ||||||||||||| | |||||| ||||||||| || Sbjct 45402 GAATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGAGTTCGAGTCTTA 45343 Query 90873 CCTCTCGTGC 90882 | || ||||| Sbjct 45342 CTTCCCGTGC 45333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464939964000120