Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_022071.1 Length=76129 Score E Sequences producing significant alignments: (Bits) Value seq1578 93.3 2e-14 seq4709 89.7 3e-13 seq3711 86.0 3e-12 seq2444 82.4 4e-11 >seq1578 Length=86006 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 63172 GCCACCTTAGCTCAGTTGGTAGAGCAGCGCCTTCGTAACGCGCAGGTCAGCGGTTCGATT 63231 ||||| |||||||||||||||||||| ||| ||||||| ||| ||||| ||||||||| | Sbjct 85890 GCCACTTTAGCTCAGTTGGTAGAGCAACGCATTCGTAATGCGTAGGTCTGCGGTTCGAGT 85831 Query 63232 CCGCTAGGTGGCTC 63245 |||| | ||||||| Sbjct 85830 CCGCAAAGTGGCTC 85817 >seq4709 Length=8072 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 63169 AAGGCCACCTTAGCTCAGTTGGTAGAGCAGCGCCTTCGTAACGCGCAGGTCAGCGGTTCG 63228 || ||||| |||||||||| ||||||||||||| ||||||||||||||||| || || || Sbjct 204 AAAGCCACTTTAGCTCAGTCGGTAGAGCAGCGCATTCGTAACGCGCAGGTCGGCAGTCCG 263 Query 63229 ATTCCGCTAGGTGGCTC 63245 | || || | ||||||| Sbjct 264 AGTCTGCCAAGTGGCTC 280 >seq3711 Length=63627 Score = 86.0 bits (94), Expect = 3e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 64829 GTCTTTTGCCTCGTTAGCTCAGTTGGT-AGAGCAGCCGACTCTTAATCGGCGGGTCACAG 64887 || ||| ||||| |||||||||||||| |||||| | |||| |||||| | ||||| ||| Sbjct 42854 GTTTTTCGCCTCCTTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGGGGGTCTCAG 42913 Query 64888 GTTCAAGTCCTGTACGGGG 64906 |||||||||||| | |||| Sbjct 42914 GTTCAAGTCCTGAAGGGGG 42932 >seq2444 Length=44322 Score = 82.4 bits (90), Expect = 4e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 63172 GCCACCTTAGCTCAGTTGGTAGAGCAGCGCCTTCGTAACGCGCAGGTCAGCGGTTCGATT 63231 ||||| |||||||||| ||||||||||||| ||||||||||||||||| | |||||| Sbjct 16403 GCCACTTTAGCTCAGTCGGTAGAGCAGCGCATTCGTAACGCGCAGGTCGTCAGTTCGAGC 16344 Query 63232 CCGCTAGGTGGCTCG 63246 | | | |||||||| Sbjct 16343 CTGATGAGTGGCTCG 16329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243472868666510