Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq4736 87.8 3e-12 seq2439 86.0 1e-11 seq883 86.0 1e-11 seq165 84.2 4e-11 seq2 84.2 4e-11 >seq4736 Length=4467 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 ||||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||| | Sbjct 3810 TTAGCTCAGTTGGTTAGAGCACCTGACTGTTAATCAGGGGGTCCTGGGTTCAAGTCCCCG 3751 Query 122833 A 122833 | Sbjct 3750 A 3750 >seq2439 Length=54089 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCC 122829 |||||||||||||||||||||||||||| |||||||||||||| | ||||| ||||| Sbjct 49441 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGTTGGTTCAAGTCC 49385 >seq883 Length=4848 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCC 122829 |||||||||||||||||||||||||||| |||||||||||||| | ||||| ||||| Sbjct 2741 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGTTGGTTCAAGTCC 2797 >seq165 Length=111243 Score = 84.2 bits (92), Expect = 4e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCC 122829 ||||||||||||||||||||||||||| |||||||||||||| | ||||| ||||| Sbjct 96178 TAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCATAGGTTCAAGTCC 96233 >seq2 Length=178159 Score = 84.2 bits (92), Expect = 4e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||||||||||||||||||||||| |||||||| ||||||| ||||| || || || Sbjct 23772 TTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGGGGGTCCTTGGTTCAAGCCCAAG 23713 Query 122833 A 122833 | Sbjct 23712 A 23712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825864158127960