Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_023500.1 Length=43301 Score E Sequences producing significant alignments: (Bits) Value seq4558 111 4e-20 >seq4558 Length=43522 Score = 111 bits (122), Expect = 4e-20 Identities = 216/312 (69%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 43 GAAAATCGTAAAGCTAGACATGATTATAATATTGAAGACACGATTGAAGCGGGAATTGTA 102 |||||||| ||||| | ||||||||| |||| | || || || |||||||||| | Sbjct 34084 GAAAATCGAAAAGCCCGCCATGATTATTTTATTCACGAAACTTACGAGGCGGGAATTGAA 34025 Query 103 TTGCAAGGCACAGAAATAAAA--TCAATTCGCCGAGGTAGTGCTAACCTTAAAGATAGTT 160 | ||||||| ||| ||||| | | ||||| | || || || | || || |||| Sbjct 34024 CTTAAAGGCACTGAAGTAAAAAGTTTGTGCGCCG--GCAGAGCAAATTTAAAGGACAGTT 33967 Query 161 ATGCGCAAGTTAAAAACGGTGAAATGTAT-TTGAATAATATGCATAT-AGCACCATACGA 218 | || ||||||||||||| ||||| | | ||||| | |||||| || ||| || || || Sbjct 33966 ACGCCGAAGTTAAAAACGGCGAAATTTTTGTTGAACA-TATGCACATCAGC-CCTTATGA 33909 Query 219 AGAAGGGAATCGTTTTAATCACGATCCTCTTCGTTCTCGAAAATTATTATTGCATAAACG 278 | | || ||| |||||||||||||||| | | || ||| | ||| |||| || Sbjct 33908 ACAGGGAAATATTTTTAATCACGATCCTTTGAGACGCCGTAAACTTTTAATGCACAAGAA 33849 Query 279 TGAAATCATTAAATTAGGTGATCAAACACGTGAAATTGGTTATTCGATTGTGCCGTTAAA 338 ||||| | ||| | | |||| ||||||| |||| | | | | ||| |||| Sbjct 33848 AGAAATTTTAAAACTTTTCGGCAAAACTCGTGAAAAAGGTTTTACTTTAATCCCGCTAAA 33789 Query 339 GCTTTATTTGAA 350 ||||||| || Sbjct 33788 AATTTATTTTAA 33777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138433217274594