Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_023560.1 Length=43454 Score E Sequences producing significant alignments: (Bits) Value seq3873 91.5 4e-14 seq1730 86.0 2e-12 >seq3873 Length=73798 Score = 91.5 bits (100), Expect = 4e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 1 GCGGACGTGGCGGAATTGGCAGACGCGCAGGATTAAGGATCCTGTGGTAGAAATACCGTA 60 || || ||||||||||||||||||||||||| || ||| |||||||||| |||| ||| Sbjct 20102 GCAGAAGTGGCGGAATTGGCAGACGCGCAGGCTTCAGGTGCCTGTGGTAGCAATATCGTG 20161 Query 61 TGGGTTCGACTCCCATCGCCCGCAT 85 ||||||| | ||||||| | |||| Sbjct 20162 TGGGTTCAAGTCCCATCTTCTGCAT 20186 >seq1730 Length=88350 Score = 86.0 bits (94), Expect = 2e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 8 TGGCGGAATTGGCAGACGCGCAGGATTAAGGATCCTGTGGTAGAAATACCGTATGGGTTC 67 |||||||||||||||||||||||| || ||| |||||||||| |||| ||| ||||||| Sbjct 48673 TGGCGGAATTGGCAGACGCGCAGGCTTCAGGTGCCTGTGGTAGCAATATCGTGTGGGTTC 48614 Query 68 GACTCCCATCGCCCGCA 84 | |||||| || ||| Sbjct 48613 AAGTCCCATTTCCTGCA 48597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138922787629008