Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alces_20americanus_20[genbank_20GCA_5F900089705.1_202017-06-20] 5,099 sequences; 74,234,735 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq2964 201 2e-46 >seq2964 Length=2227 Score = 201 bits (222), Expect = 2e-46 Identities = 473/707 (67%), Gaps = 19/707 (3%) Strand=Plus/Minus Query 187031 GGCGATATTCATTTTCATGACCTTGACTACAGCCCATTATTCCCGCAATTCAACTGTATG 187090 || || || |||||||| || || ||||| || || |||||| |||||||||||| Sbjct 1729 GGGGAGATCCATTTTCACGATCTCGACTATTCACCGTTCTTCCCGATGTTCAACTGTATG 1670 Query 187091 CTTATTGATATCAAAGGCATGTTTGAAGGCGGTTTCAAAATGGGTAATGCTGAAATCGAA 187150 || || ||| || || ||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct 1669 CTGATCGATGTCGGCGGAATGCTGGAACGCGGTTTCAAGATGGGTAATGCCGAAATCGAA 1610 Query 187151 GAACCAAACAGTATTAGCACTGCTGCCACTGTTGTAACTCAGATTATTCAGCAAGTAAGT 187210 ||| || || || || || || | ||| | ||||| || || || Sbjct 1609 TCACCTAAGTCAATCAGTACCGCAACCGCGGTTACCGCACAGATCATCGCCCAGGTTGCC 1550 Query 187211 AGCCATATCTACGGCGGTAACACGATCAATAGAATCGACGAAGTCCTAGCACCTTATGTT 187270 ||||||||||||||||||| || ||||| | || || || || || || |||||| Sbjct 1549 AGCCATATCTACGGCGGTACAACCATCAACCGCTGTGATGAGGTGCTTGCCCCGTATGTT 1490 Query 187271 CGTAAGTCATATTATAAATGGCTC-GAAGTAGGTCGCGAAGA---ACATCCCGACTCTGA 187326 ||| | | || || | || |||| || || | || |||| || ||| Sbjct 1489 ACCAAGAGTT-TCATGAA-GTATCAGAAGATGGCCGAGGAGTGGCACATTCC-----TGA 1437 Query 187327 TTCTAAAGCTGCTATCTTTGCACGAAAGCGTGTTGAAAAGGAAACGTTCGATGCATTCCA 187386 | | | | |||||| ||| ||| ||||||||| | || || ||||| Sbjct 1436 TCCGGAC------AGCTTTGCCCGAGCCCGTACTGAAAAGGAGTGCTATGACGCCTTCCA 1383 Query 187387 GACGTTTGAATATCAAGTCAATACGATGCAGACTTCAAACGGTCAGACACCATTCACGAC 187446 | | |||||||| |||| || || |||| || || ||||||||||| || ||| || Sbjct 1382 GTCTCTTGAATATGAAGTAAACACCCTGCATACCTCCAACGGTCAGACTCCGTTCGTAAC 1323 Query 187447 AATCAACTTCGGGTTAGGTACGTCGTGGGAAGAAAAACTTATTCAAAAAAGTATTCTTCA 187506 || ||||| | || || || ||||| | || || || || |||||| | Sbjct 1322 TCTCGGTTTCGGTCTGGGAACATCCTGGGAGTCACGTCTGATCCAGAAGTCTATTCTGAA 1263 Query 187507 GAATCGTATTGCAGGTCTAGGTAAGACTAAGAAAACTGCTATTTTCCCTAAGCTTGT-TT 187565 ||| | ||||| ||||| || | | | | |||||| ||||||||||||| || || Sbjct 1262 GAACAGAATTGCTGGTCTCGGCCGCAATCACAGAACTGCGGTTTTCCCTAAGCTGGTGTT 1203 Query 187566 TCACATTGAGAGACGGCGTGAACCTAAAAGAAGGCGACCCGTGCTACGCCATCAAAAAGT 187625 | ||| || || || |||||| ||||| || || || ||||| ||||| ||| Sbjct 1202 TGCCATCAAG-GAGGGACTGAACCGTAAAGAGGGTGATCCTAACTACGATATCAAGAAGC 1144 Query 187626 TAGCTCTTGAATGTGCAAGTAAGCGTATGTACCCAGACATTTTGAACTATGACAAACTAG 187685 | ||||||||||| || ||| | ||||| || || ||| ||||||| || | | | Sbjct 1143 TGGCTCTTGAATGCGCCTCCAAGAGAATGTATCCGGATATTCTGAACTACGATCAGGTTG 1084 Query 187686 TTGAAACGACTGGTGGGTTTAAGTCTCCAATGGGCTGTCGCTCATTC 187732 | | || ||| || ||| |||| |||||||| ||||||||| Sbjct 1083 TGAAGGTTACCGGTTCATTCAAGACTCCGATGGGCTGCCGCTCATTC 1037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790106437380960